Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AC009101.1-201ENST00000568135 242 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 SLC25A36P1-201ENST00000590111 465 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AC009955.2-201ENST00000597288 542 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AC078795.3-201ENST00000602913 472 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 LSM1P2-201ENST00000604911 322 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AC100793.4-201ENST00000613683 429 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AC007742.2-201ENST00000618226 398 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AL359757.1-201ENST00000623176 255 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 CASC19-212ENST00000641153 1287 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 AL133243.4-201ENST00000623116 3109 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 HSPD1P1-201ENST00000503199 1726 ntBASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
SSBP3Q9BWW4 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 ZNF833P-201ENST00000424938 1494 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AC011008.2-201ENST00000624866 3352 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 SNORD56.4-201ENST00000363883 71 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 RNU6-157P-201ENST00000383957 107 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 RPL5P5-201ENST00000392009 893 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 ERHP2-201ENST00000402323 299 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AL359715.1-201ENST00000404330 555 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 RN7SKP166-201ENST00000410812 305 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 CCDC58P2-201ENST00000417131 366 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 CHCHD3P1-201ENST00000425516 676 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 RPL5P34-201ENST00000426545 891 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 MYO5BP3-201ENST00000431872 1279 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 MYL6P3-201ENST00000436904 432 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AL604028.2-201ENST00000437848 788 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 RPS27P5-201ENST00000444247 244 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 VN1R6P-201ENST00000458417 907 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 RPL23AP8-201ENST00000479812 475 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AC069528.1-202ENST00000482888 637 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AC096743.1-201ENST00000485172 319 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 FCF1P3-201ENST00000496394 590 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AC023050.1-201ENST00000498198 304 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AC055733.3-201ENST00000505214 523 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 OR10J9P-201ENST00000511932 987 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AC116347.2-201ENST00000514912 523 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 SCARNA11.1-201ENST00000516918 132 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 IGLC4-201ENST00000517690 248 ntBASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSBP3Q9BWW4 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms