Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AC004158.1-201ENST00000564508 4319 ntBASIC4.81□□□□□ -1.64
CHRDL1Q9BU40 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CHRDL1Q9BU40 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.81□□□□□ -1.64
CHRDL1Q9BU40 AL121768.1-201ENST00000613917 2544 ntBASIC4.81□□□□□ -1.64
CHRDL1Q9BU40 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CHRDL1Q9BU40 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.81□□□□□ -1.64
CHRDL1Q9BU40 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 OFD1P15Y-201ENST00000411536 1392 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AC109446.4-201ENST00000623235 2755 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 OR7E25P-201ENST00000344844 931 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 MIR365B-201ENST00000362317 111 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 RCC2P2-201ENST00000422174 918 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AL354766.1-201ENST00000423396 542 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AC094019.1-201ENST00000434678 472 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 PPIAP10-201ENST00000438675 458 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 GAPDHP23-201ENST00000444823 993 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 NPM1P19-201ENST00000450070 712 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AL359839.1-201ENST00000451975 1160 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 RAB28P2-201ENST00000454299 641 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 RPS7P10-201ENST00000464254 603 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AC022336.1-201ENST00000475510 337 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 RPL9P15-201ENST00000491096 532 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 SNX18P24-201ENST00000505249 671 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 Y_RNA.710-201ENST00000516975 110 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 OR8Q1P-201ENST00000526467 655 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AC124856.1-201ENST00000600819 896 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 MIR6780B-201ENST00000610307 79 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AL137067.2-201ENST00000621202 131 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 SAMMSON-209ENST00000641222 1100 ntBASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CHRDL1Q9BU40 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHRDL1Q9BU40 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHRDL1Q9BU40 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHRDL1Q9BU40 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHRDL1Q9BU40 CASC19-248ENST00000641674 1356 ntBASIC4.79□□□□□ -1.64
CHRDL1Q9BU40 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHRDL1Q9BU40 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHRDL1Q9BU40 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHRDL1Q9BU40 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHRDL1Q9BU40 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHRDL1Q9BU40 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.79□□□□□ -1.64
CHRDL1Q9BU40 AP000473.2-201ENST00000602659 1537 ntBASIC4.79□□□□□ -1.64
CHRDL1Q9BU40 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.79□□□□□ -1.64
CHRDL1Q9BU40 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CHRDL1Q9BU40 RN7SKP146-201ENST00000410242 334 ntBASIC4.79□□□□□ -1.64
CHRDL1Q9BU40 RN7SKP38-201ENST00000410782 309 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms