Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MTND6P2-201ENST00000512226 524 ntBASIC7.32□□□□□ -1.24
ABCA3Q99758 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC7.32□□□□□ -1.24
ABCA3Q99758 C1GALT1P3-201ENST00000522049 819 ntBASIC7.32□□□□□ -1.24
ABCA3Q99758 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
ABCA3Q99758 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC7.32□□□□□ -1.24
ABCA3Q99758 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC7.32□□□□□ -1.24
ABCA3Q99758 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC7.32□□□□□ -1.24
ABCA3Q99758 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC7.32□□□□□ -1.24
ABCA3Q99758 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
ABCA3Q99758 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
ABCA3Q99758 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ABCA3Q99758 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC7.31□□□□□ -1.24
ABCA3Q99758 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC7.31□□□□□ -1.24
ABCA3Q99758 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC7.31□□□□□ -1.24
ABCA3Q99758 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ABCA3Q99758 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ABCA3Q99758 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC7.31□□□□□ -1.24
ABCA3Q99758 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ABCA3Q99758 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.31□□□□□ -1.24
ABCA3Q99758 RN7SKP151-201ENST00000410230 316 ntBASIC7.31□□□□□ -1.24
ABCA3Q99758 AC073264.2-201ENST00000448886 166 ntBASIC7.31□□□□□ -1.24
ABCA3Q99758 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC7.31□□□□□ -1.24
ABCA3Q99758 RPL7P16-201ENST00000479738 738 ntBASIC7.31□□□□□ -1.24
ABCA3Q99758 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC7.31□□□□□ -1.24
ABCA3Q99758 RNA5SP373-201ENST00000517271 95 ntBASIC7.31□□□□□ -1.24
ABCA3Q99758 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.31□□□□□ -1.24
ABCA3Q99758 DHFRP1-201ENST00000579682 559 ntBASIC7.31□□□□□ -1.24
ABCA3Q99758 AP005403.1-201ENST00000579720 229 ntBASIC7.31□□□□□ -1.24
ABCA3Q99758 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ABCA3Q99758 AC020765.1-201ENST00000604296 328 ntBASIC7.31□□□□□ -1.24
ABCA3Q99758 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
ABCA3Q99758 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC7.31□□□□□ -1.24
ABCA3Q99758 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ABCA3Q99758 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ABCA3Q99758 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ABCA3Q99758 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
ABCA3Q99758 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ABCA3Q99758 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC7.31□□□□□ -1.24
ABCA3Q99758 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
ABCA3Q99758 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.31□□□□□ -1.24
ABCA3Q99758 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
ABCA3Q99758 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
ABCA3Q99758 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
ABCA3Q99758 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
ABCA3Q99758 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ABCA3Q99758 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC7.3□□□□□ -1.24
ABCA3Q99758 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ABCA3Q99758 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
ABCA3Q99758 RN7SKP6-201ENST00000364795 319 ntBASIC7.3□□□□□ -1.24
ABCA3Q99758 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
ABCA3Q99758 GSTM5P1-201ENST00000434751 660 ntBASIC7.3□□□□□ -1.24
ABCA3Q99758 ZDHHC20P1-204ENST00000435787 423 ntBASIC7.3□□□□□ -1.24
ABCA3Q99758 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC7.3□□□□□ -1.24
ABCA3Q99758 RPS7P6-201ENST00000485777 579 ntBASIC7.3□□□□□ -1.24
ABCA3Q99758 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC7.3□□□□□ -1.24
ABCA3Q99758 OR7H2P-201ENST00000513483 306 ntBASIC7.3□□□□□ -1.24
ABCA3Q99758 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC7.3□□□□□ -1.24
ABCA3Q99758 ATP5J2P6-201ENST00000565203 266 ntBASIC7.3□□□□□ -1.24
ABCA3Q99758 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC7.3□□□□□ -1.24
ABCA3Q99758 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.3□□□□□ -1.24
ABCA3Q99758 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
ABCA3Q99758 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.3□□□□□ -1.24
ABCA3Q99758 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ABCA3Q99758 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.3□□□□□ -1.24
ABCA3Q99758 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
ABCA3Q99758 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
ABCA3Q99758 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ABCA3Q99758 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC7.3□□□□□ -1.24
ABCA3Q99758 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ABCA3Q99758 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ABCA3Q99758 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
ABCA3Q99758 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
ABCA3Q99758 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
ABCA3Q99758 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC7.3□□□□□ -1.24
ABCA3Q99758 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
ABCA3Q99758 IRF5P1-201ENST00000504852 2164 ntBASIC7.3□□□□□ -1.24
ABCA3Q99758 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.3□□□□□ -1.24
ABCA3Q99758 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ABCA3Q99758 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
ABCA3Q99758 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.3□□□□□ -1.24
ABCA3Q99758 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
ABCA3Q99758 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
ABCA3Q99758 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC7.3□□□□□ -1.24
ABCA3Q99758 AC073410.1-201ENST00000435125 589 ntBASIC7.3□□□□□ -1.24
ABCA3Q99758 NANOGP9-201ENST00000439890 892 ntBASIC7.3□□□□□ -1.24
ABCA3Q99758 RPL34P20-201ENST00000442771 351 ntBASIC7.3□□□□□ -1.24
ABCA3Q99758 AL451063.1-201ENST00000450164 1133 ntBASIC7.3□□□□□ -1.24
ABCA3Q99758 NDUFAF4P3-201ENST00000456468 525 ntBASIC7.3□□□□□ -1.24
ABCA3Q99758 AL445687.2-201ENST00000458156 728 ntBASIC7.3□□□□□ -1.24
ABCA3Q99758 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC7.3□□□□□ -1.24
ABCA3Q99758 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
ABCA3Q99758 AL163952.1-202ENST00000569625 600 ntBASIC7.3□□□□□ -1.24
ABCA3Q99758 AC005084.1-201ENST00000605160 304 ntBASIC7.3□□□□□ -1.24
ABCA3Q99758 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC7.3□□□□□ -1.24
ABCA3Q99758 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ABCA3Q99758 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
ABCA3Q99758 MT-RNR2-201ENST00000387347 1559 ntBASIC7.29□□□□□ -1.24
ABCA3Q99758 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.29□□□□□ -1.24
ABCA3Q99758 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
ABCA3Q99758 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms