Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AL121594.2-201ENST00000541658 472 ntBASIC5.47□□□□□ -1.53
COL21A1Q96P44 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.47□□□□□ -1.53
COL21A1Q96P44 HMGN2P47-201ENST00000559378 272 ntBASIC5.47□□□□□ -1.53
COL21A1Q96P44 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.47□□□□□ -1.53
COL21A1Q96P44 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.47□□□□□ -1.53
COL21A1Q96P44 AL163952.1-202ENST00000569625 600 ntBASIC5.47□□□□□ -1.53
COL21A1Q96P44 GARSP1-201ENST00000570895 719 ntBASIC5.47□□□□□ -1.53
COL21A1Q96P44 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.47□□□□□ -1.53
COL21A1Q96P44 TXNP4-201ENST00000575018 310 ntBASIC5.47□□□□□ -1.53
COL21A1Q96P44 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.47□□□□□ -1.53
COL21A1Q96P44 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.47□□□□□ -1.53
COL21A1Q96P44 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.47□□□□□ -1.53
COL21A1Q96P44 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.47□□□□□ -1.53
COL21A1Q96P44 AL022394.1-201ENST00000606979 292 ntBASIC5.47□□□□□ -1.53
COL21A1Q96P44 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.47□□□□□ -1.53
COL21A1Q96P44 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.47□□□□□ -1.53
COL21A1Q96P44 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL21A1Q96P44 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL21A1Q96P44 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.47□□□□□ -1.53
COL21A1Q96P44 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL21A1Q96P44 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.47□□□□□ -1.53
COL21A1Q96P44 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL21A1Q96P44 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
COL21A1Q96P44 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
COL21A1Q96P44 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.46□□□□□ -1.53
COL21A1Q96P44 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
COL21A1Q96P44 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL21A1Q96P44 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL21A1Q96P44 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 RN7SKP77-201ENST00000363261 353 ntBASIC5.46□□□□□ -1.54
COL21A1Q96P44 SUGT1P2-201ENST00000379452 992 ntBASIC5.46□□□□□ -1.54
COL21A1Q96P44 SNORA5.1-201ENST00000384275 131 ntBASIC5.46□□□□□ -1.54
COL21A1Q96P44 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 RPS4XP5-201ENST00000419038 768 ntBASIC5.46□□□□□ -1.54
COL21A1Q96P44 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 MTND2P40-201ENST00000436718 841 ntBASIC5.46□□□□□ -1.54
COL21A1Q96P44 AC096775.1-201ENST00000437724 448 ntBASIC5.46□□□□□ -1.54
COL21A1Q96P44 VN1R110P-201ENST00000438988 971 ntBASIC5.46□□□□□ -1.54
COL21A1Q96P44 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 AL122020.1-201ENST00000472287 459 ntBASIC5.46□□□□□ -1.54
COL21A1Q96P44 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
COL21A1Q96P44 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL21A1Q96P44 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 AL138895.2-201ENST00000603019 178 ntBASIC5.46□□□□□ -1.54
COL21A1Q96P44 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 LSM1P2-201ENST00000604911 322 ntBASIC5.46□□□□□ -1.54
COL21A1Q96P44 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 AL139099.4-201ENST00000614802 114 ntBASIC5.46□□□□□ -1.54
COL21A1Q96P44 AC015712.7-201ENST00000615211 635 ntBASIC5.46□□□□□ -1.54
COL21A1Q96P44 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 AP000473.2-201ENST00000602659 1537 ntBASIC5.46□□□□□ -1.54
COL21A1Q96P44 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL21A1Q96P44 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 AL022311.1-201ENST00000623726 19416 ntBASIC5.46□□□□□ -1.54
COL21A1Q96P44 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 AC027088.4-201ENST00000611559 1947 ntBASIC5.46□□□□□ -1.54
COL21A1Q96P44 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL21A1Q96P44 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.46□□□□□ -1.54
COL21A1Q96P44 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.46□□□□□ -1.54
COL21A1Q96P44 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
COL21A1Q96P44 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
COL21A1Q96P44 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL21A1Q96P44 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL21A1Q96P44 AP004607.3-201ENST00000530354 3915 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 AL034546.1-201ENST00000623740 3693 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
COL21A1Q96P44 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.45□□□□□ -1.54
COL21A1Q96P44 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL21A1Q96P44 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL21A1Q96P44 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL21A1Q96P44 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
COL21A1Q96P44 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
COL21A1Q96P44 RNA5SP477-201ENST00000362639 119 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
COL21A1Q96P44 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
COL21A1Q96P44 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
COL21A1Q96P44 RPL11P3-201ENST00000395256 523 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 PEX12P1-201ENST00000400284 1048 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
COL21A1Q96P44 SNORA11B-201ENST00000408175 129 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.45□□□□□ -1.54
COL21A1Q96P44 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.45□□□□□ -1.54
COL21A1Q96P44 BX284632.2-201ENST00000421091 399 ntBASIC5.45□□□□□ -1.54
COL21A1Q96P44 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.45□□□□□ -1.54
COL21A1Q96P44 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.45□□□□□ -1.54
COL21A1Q96P44 AL512605.1-202ENST00000441919 381 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms