Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 RPL7P51-201ENST00000490532 749 ntBASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 OR7E157P-201ENST00000494376 911 ntBASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 RNU6-615P-201ENST00000516065 106 ntBASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 AL352984.2-202ENST00000613699 155 ntBASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 AL357153.4-201ENST00000620487 1016 ntBASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 SNORA17.5-201ENST00000630429 132 ntBASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 KARSP1-201ENST00000451871 1752 ntBASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.77□□□□□ -1.49
ECHDC3Q96DC8 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 GTF2IP4-201ENST00000453092 2054 ntBASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 TMSB4XP4-201ENST00000323496 618 ntBASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 RNA5SP30-201ENST00000365552 115 ntBASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 RNA5SP91-201ENST00000390902 119 ntBASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 OR5W1P-201ENST00000423705 938 ntBASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 IGBP1P1-201ENST00000554337 1009 ntBASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 HSPE1P2-201ENST00000554777 306 ntBASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 AC020978.7-201ENST00000575953 1187 ntBASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 AC009237.12-201ENST00000604755 742 ntBASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 AC126175.1-201ENST00000617041 758 ntBASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 NR1H5P-201ENST00000452683 1377 ntBASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 AL442128.2-201ENST00000620246 1824 ntBASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
ECHDC3Q96DC8 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 AC027279.1-201ENST00000568885 4284 ntBASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 RNA5SP46-201ENST00000362370 120 ntBASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 RNA5SP122-201ENST00000384457 108 ntBASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 AL596448.1-201ENST00000415024 392 ntBASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 AL662874.1-201ENST00000426065 230 ntBASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 AC092651.1-201ENST00000426110 312 ntBASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 KRT8P51-201ENST00000438938 274 ntBASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 AP000281.1-201ENST00000444036 316 ntBASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 SETP20-201ENST00000457046 852 ntBASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 AC138866.2-201ENST00000508650 584 ntBASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 SNORA43.3-201ENST00000517240 103 ntBASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 TMEM97P2-201ENST00000517841 403 ntBASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.75□□□□□ -1.49
ECHDC3Q96DC8 NPM1P42-201ENST00000560329 862 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms