Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 ERMAP-202ENST00000372514 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-CQ95604 SCYL3-203ENST00000367772 3090 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
HLA-CQ95604 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC8.11□□□□□ -1.11
HLA-CQ95604 AC006213.6-201ENST00000623722 4179 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 PDPR-210ENST00000568530 7223 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-CQ95604 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
HLA-CQ95604 SEL1L3-201ENST00000264868 4369 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-CQ95604 MMGT1-201ENST00000305963 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-CQ95604 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
HLA-CQ95604 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-CQ95604 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-CQ95604 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC8.11□□□□□ -1.11
HLA-CQ95604 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC8.11□□□□□ -1.11
HLA-CQ95604 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-CQ95604 ABCA11P-201ENST00000451020 1815 ntTSL 2 BASIC8.11□□□□□ -1.11
HLA-CQ95604 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-CQ95604 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC8.11□□□□□ -1.11
HLA-CQ95604 BBS9-202ENST00000350941 3899 ntTSL 5 BASIC8.11□□□□□ -1.11
HLA-CQ95604 Y_RNA.144-201ENST00000363521 113 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 RN7SKP187-201ENST00000365536 330 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
HLA-CQ95604 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
HLA-CQ95604 SNORA7B-201ENST00000384360 139 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 RNU6-452P-201ENST00000384406 107 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 MIR606-201ENST00000384851 96 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 AC245036.1-201ENST00000391727 309 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 ARSFP1-201ENST00000398758 477 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 Z97832.1-201ENST00000402490 328 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 AL356432.1-201ENST00000405809 419 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC8.11□□□□□ -1.11
HLA-CQ95604 AC231533.2-201ENST00000419045 978 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC8.11□□□□□ -1.11
HLA-CQ95604 AL358934.1-201ENST00000432346 324 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 ANXA2P2-201ENST00000435128 1020 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 AC009961.2-201ENST00000435771 251 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 RPL12P49-201ENST00000441100 121 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 MTND6P13-201ENST00000443510 523 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC8.11□□□□□ -1.11
HLA-CQ95604 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC8.11□□□□□ -1.11
HLA-CQ95604 RGS5-217ENST00000451759 835 ntTSL 3 BASIC8.11□□□□□ -1.11
HLA-CQ95604 AC092570.2-201ENST00000452117 1143 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC8.11□□□□□ -1.11
HLA-CQ95604 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-CQ95604 RPL38P1-201ENST00000460914 211 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 AC112206.1-201ENST00000468416 477 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 RPS3P7-201ENST00000488662 726 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 AC012170.1-201ENST00000495139 359 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 KLRA1P-201ENST00000503499 986 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC8.11□□□□□ -1.11
HLA-CQ95604 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC8.11□□□□□ -1.11
HLA-CQ95604 MTND6P2-201ENST00000512226 524 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 RN7SKP70-201ENST00000516655 271 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC8.11□□□□□ -1.11
HLA-CQ95604 AC109635.6-201ENST00000525487 1113 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC8.11□□□□□ -1.11
HLA-CQ95604 AP003122.4-201ENST00000530980 758 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
HLA-CQ95604 AC068587.4-201ENST00000533893 186 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 AC011611.1-201ENST00000552179 197 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC8.11□□□□□ -1.11
HLA-CQ95604 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC8.11□□□□□ -1.11
HLA-CQ95604 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC8.11□□□□□ -1.11
HLA-CQ95604 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC8.11□□□□□ -1.11
HLA-CQ95604 EIF1-207ENST00000591776 797 ntTSL 4 BASIC8.11□□□□□ -1.11
HLA-CQ95604 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC8.11□□□□□ -1.11
HLA-CQ95604 AC012507.3-201ENST00000603556 477 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 AC004853.1-201ENST00000604902 698 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC8.11□□□□□ -1.11
HLA-CQ95604 AC015819.1-201ENST00000613588 663 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC8.11□□□□□ -1.11
HLA-CQ95604 METAP1-212ENST00000625963 147 ntTSL 5 BASIC8.11□□□□□ -1.11
HLA-CQ95604 PISRT1-201ENST00000626175 531 ntBASIC8.11□□□□□ -1.11
HLA-CQ95604 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-CQ95604 C5orf66-205ENST00000555438 3246 ntTSL 3 BASIC8.11□□□□□ -1.11
HLA-CQ95604 CD200-202ENST00000383681 1997 ntTSL 2 BASIC8.11□□□□□ -1.11
HLA-CQ95604 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC8.11□□□□□ -1.11
HLA-CQ95604 MET-202ENST00000397752 6635 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-CQ95604 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
HLA-CQ95604 AKAP2-201ENST00000259318 3101 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
HLA-CQ95604 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.11□□□□□ -1.11
HLA-CQ95604 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-CQ95604 IL5RA-206ENST00000430514 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-CQ95604 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-CQ95604 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-CQ95604 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
HLA-CQ95604 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC8.11□□□□□ -1.11
HLA-CQ95604 UBE2N-205ENST00000550657 3018 ntTSL 2 BASIC8.11□□□□□ -1.11
HLA-CQ95604 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-CQ95604 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC8.1□□□□□ -1.11
HLA-CQ95604 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
HLA-CQ95604 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC8.1□□□□□ -1.11
HLA-CQ95604 GBP5-201ENST00000370459 2011 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
HLA-CQ95604 TP63-203ENST00000354600 4668 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-CQ95604 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC8.1□□□□□ -1.11
HLA-CQ95604 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-CQ95604 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-CQ95604 OR5BR1P-201ENST00000524992 1330 ntBASIC8.1□□□□□ -1.11
HLA-CQ95604 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC8.1□□□□□ -1.11
HLA-CQ95604 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
HLA-CQ95604 ALG9-210ENST00000531154 1930 ntTSL 2 BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms