Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 GAPDHP58-201ENST00000438477 1006 ntBASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 RSU1P1-201ENST00000453416 441 ntBASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 MEMO1P4-201ENST00000453590 386 ntBASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 DPPA3P2-202ENST00000557188 1219 ntBASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 NPM1P42-201ENST00000560329 862 ntBASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 AL589674.2-201ENST00000604304 337 ntBASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 RPS3AP2-201ENST00000407190 754 ntBASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 AL590399.2-201ENST00000427536 309 ntBASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 SUMO2P3-201ENST00000438311 288 ntBASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 RPS7P3-201ENST00000443360 580 ntBASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 AL603882.1-201ENST00000463059 681 ntBASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 RN7SL826P-201ENST00000479724 288 ntBASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 RPS17P5-201ENST00000498293 408 ntBASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 AC139365.2-201ENST00000517972 253 ntBASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 PCNAP4-201ENST00000532690 730 ntBASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 CR383656.6-201ENST00000550518 394 ntBASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 AL035661.1-201ENST00000620459 1144 ntBASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 AC068870.2-201ENST00000620635 389 ntBASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 AC021766.1-201ENST00000624404 741 ntBASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHROOM3Q8TF72 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 AC007342.5-201ENST00000571340 2142 ntBASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 RNA5SP132-201ENST00000364725 118 ntBASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 GNG5P2-201ENST00000372054 207 ntBASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 NPM1P4-201ENST00000414095 812 ntBASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 HMGB3P24-201ENST00000433260 622 ntBASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 RPS3AP38-201ENST00000435889 763 ntBASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 PDCL3P4-201ENST00000489621 720 ntBASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 AC022404.1-201ENST00000555320 273 ntBASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 AC074050.1-201ENST00000563247 211 ntBASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 MIR6810-201ENST00000622701 70 ntBASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 AL161901.1-201ENST00000624954 3425 ntBASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 AL161912.4-201ENST00000623889 2468 ntBASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM3Q8TF72 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 RNA5SP91-201ENST00000390902 119 ntBASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 AC007842.1-201ENST00000597336 2039 ntBASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SHROOM3Q8TF72 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms