Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 AL499605.1-201ENST00000604628 403 ntBASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 FAM72A-208ENST00000607379 1139 ntBASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 AL122023.1-201ENST00000622847 530 ntBASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
CCDC112Q8NEF3 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 RPS12P17-201ENST00000438591 377 ntBASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 LINC02210-201ENST00000444561 288 ntBASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 AC083899.1-201ENST00000454465 3819 ntBASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 AC112484.3-201ENST00000505910 329 ntBASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 HMGN1P16-201ENST00000508308 283 ntBASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 AC105384.2-201ENST00000508433 640 ntBASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 AC090888.3-201ENST00000558917 509 ntBASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 AL355480.1-201ENST00000629041 99 ntBASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 AC073488.6-201ENST00000632293 754 ntBASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 AP000550.3-201ENST00000637734 379 ntBASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC112Q8NEF3 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.4
CCDC112Q8NEF3 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
CCDC112Q8NEF3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.34□□□□□ -1.4
CCDC112Q8NEF3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.34□□□□□ -1.4
CCDC112Q8NEF3 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 AL445928.1-201ENST00000435545 222 ntBASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 SEPT14P12-201ENST00000442280 560 ntBASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 TRIM60P16-201ENST00000444048 694 ntBASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 AC010240.2-201ENST00000445363 1205 ntBASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 RPS17P5-201ENST00000498293 408 ntBASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 AC095052.1-201ENST00000509955 863 ntBASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 AC108103.1-201ENST00000511286 446 ntBASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 AC110056.1-201ENST00000525759 911 ntBASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 NPIPB14P-203ENST00000532298 987 ntBASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 AC084121.1-201ENST00000533882 835 ntBASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 AL845552.1-201ENST00000556820 323 ntBASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 AL078601.3-201ENST00000573303 535 ntBASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 AL589765.6-201ENST00000601909 549 ntBASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 LSM1P2-201ENST00000604911 322 ntBASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 AL357562.1-201ENST00000624911 609 ntBASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 AC111152.1-202ENST00000635848 339 ntBASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC112Q8NEF3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC112Q8NEF3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC112Q8NEF3 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC112Q8NEF3 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC112Q8NEF3 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC112Q8NEF3 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC112Q8NEF3 AC018717.1-201ENST00000457712 1505 ntBASIC6.32□□□□□ -1.4
CCDC112Q8NEF3 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC112Q8NEF3 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms