Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RNU6-875P-201ENST00000516488 106 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC103855.4-201ENST00000533158 265 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC116553.2-201ENST00000564203 463 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 ULK4P1-202ENST00000565174 503 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 MTCO3P22-201ENST00000603219 784 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC068802.1-201ENST00000603420 732 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC011472.4-201ENST00000615848 491 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 uc_338.37-201ENST00000620113 186 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC078909.2-201ENST00000620584 398 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 FKBP1AP4-201ENST00000631775 336 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AC073869.7-201ENST00000640874 297 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 TET1P1-201ENST00000426627 2301 ntBASIC6.51□□□□□ -1.37
ATG4DQ86TL0 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
ATG4DQ86TL0 NEK2P2-201ENST00000438441 1338 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AC079178.2-201ENST00000439323 1624 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AC132219.2-201ENST00000624416 2327 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AL355852.1-201ENST00000454081 1771 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AC017104.4-201ENST00000636283 1592 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 Y_RNA.162-201ENST00000363683 102 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 RNA5SP355-201ENST00000365317 135 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 Y_RNA.465-201ENST00000384293 102 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 FDPSP6-201ENST00000425091 512 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AL138479.1-201ENST00000426913 484 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AL121916.1-201ENST00000429405 308 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 BTF3P10-201ENST00000433415 495 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AL161626.1-201ENST00000441480 490 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 ST13P20-201ENST00000447996 1065 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 NANOGNBP1-201ENST00000448444 480 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 PRDX1P1-201ENST00000449329 596 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 SNRPGP9-201ENST00000456025 225 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AC009063.1-201ENST00000563342 702 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AC104184.1-201ENST00000607513 721 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AL354760.1-201ENST00000608357 643 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AC092681.3-201ENST00000609463 678 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AC025594.3-201ENST00000613068 790 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AL121985.3-201ENST00000620690 523 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AC103564.3-201ENST00000621194 220 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AC211433.3-201ENST00000623770 375 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 OR1S1-201ENST00000624470 978 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AC024614.3-201ENST00000637860 256 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 AC183089.2-201ENST00000637931 916 ntBASIC6.5□□□□□ -1.37
ATG4DQ86TL0 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ATG4DQ86TL0 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms