Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 AC005725.1-201ENST00000577346 2607 ntBASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 SNURFL-201ENST00000309296 343 ntBASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 RPS17P17-201ENST00000419392 409 ntBASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 CR383656.6-201ENST00000550518 394 ntBASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 AC011840.5-201ENST00000582125 771 ntBASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 AL034408.1-201ENST00000637712 664 ntBASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 AC022893.2-201ENST00000564832 3296 ntBASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC8.33□□□□□ -1.08
CDC42BPAQ5VT25 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 AL360081.1-201ENST00000428299 555 ntBASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 RNA5SP373-201ENST00000517271 95 ntBASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 AC009962.1-201ENST00000567327 3813 ntBASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 SNORD56.6-201ENST00000384569 71 ntBASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 AL139128.1-201ENST00000413921 941 ntBASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 RPS11P7-201ENST00000442125 465 ntBASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 AC105233.1-201ENST00000498840 781 ntBASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 MTND6P2-201ENST00000512226 524 ntBASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 HNRNPCP1-201ENST00000556181 766 ntBASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
CDC42BPAQ5VT25 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 AC104581.5-201ENST00000624171 7141 ntBASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 AL365220.1-201ENST00000432923 399 ntBASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 AL596266.1-201ENST00000448132 400 ntBASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 AC092324.1-201ENST00000468671 324 ntBASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 AC079080.1-201ENST00000479841 822 ntBASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 AC137768.1-201ENST00000549998 553 ntBASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 OR11H3P-201ENST00000554547 982 ntBASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 AC095055.1-201ENST00000603472 1113 ntBASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 AL353729.2-201ENST00000605859 1249 ntBASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 AC135068.5-201ENST00000624197 983 ntBASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
CDC42BPAQ5VT25 AL589993.1-201ENST00000407450 2524 ntBASIC8.3□□□□□ -1.08
CDC42BPAQ5VT25 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
CDC42BPAQ5VT25 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
CDC42BPAQ5VT25 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
CDC42BPAQ5VT25 AL034546.1-201ENST00000623740 3693 ntBASIC8.3□□□□□ -1.08
CDC42BPAQ5VT25 RN7SKP95-201ENST00000362860 303 ntBASIC8.3□□□□□ -1.08
CDC42BPAQ5VT25 AL121977.1-201ENST00000401636 979 ntBASIC8.3□□□□□ -1.08
CDC42BPAQ5VT25 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC8.3□□□□□ -1.08
CDC42BPAQ5VT25 ATP6V1G1P7-201ENST00000415853 349 ntBASIC8.3□□□□□ -1.08
CDC42BPAQ5VT25 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC8.3□□□□□ -1.08
CDC42BPAQ5VT25 TRY2P-201ENST00000448860 689 ntBASIC8.3□□□□□ -1.08
CDC42BPAQ5VT25 AC092647.2-201ENST00000452998 253 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms