Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
HIST1H1AQ02539 AC099654.3-201ENST00000447087 1546 ntBASIC4.46□□□□□ -1.69
HIST1H1AQ02539 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
HIST1H1AQ02539 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.46□□□□□ -1.69
HIST1H1AQ02539 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
HIST1H1AQ02539 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HIST1H1AQ02539 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.46□□□□□ -1.69
HIST1H1AQ02539 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.69
HIST1H1AQ02539 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 MTCO1P46-201ENST00000451639 1491 ntBASIC4.46□□□□□ -1.7
HIST1H1AQ02539 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 AL034417.1-201ENST00000399343 800 ntBASIC4.46□□□□□ -1.7
HIST1H1AQ02539 RN7SKP146-201ENST00000410242 334 ntBASIC4.46□□□□□ -1.7
HIST1H1AQ02539 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 OR6C64P-201ENST00000419708 825 ntBASIC4.46□□□□□ -1.7
HIST1H1AQ02539 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 AL139158.1-201ENST00000424719 340 ntBASIC4.46□□□□□ -1.7
HIST1H1AQ02539 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 CBX1P2-201ENST00000453841 458 ntBASIC4.46□□□□□ -1.7
HIST1H1AQ02539 AL603882.1-201ENST00000463059 681 ntBASIC4.46□□□□□ -1.7
HIST1H1AQ02539 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 RPSAP51-201ENST00000497462 645 ntBASIC4.46□□□□□ -1.7
HIST1H1AQ02539 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 HMGN1P17-201ENST00000513734 295 ntBASIC4.46□□□□□ -1.7
HIST1H1AQ02539 SETP21-201ENST00000514799 892 ntBASIC4.46□□□□□ -1.7
HIST1H1AQ02539 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 OR8A2P-201ENST00000528631 952 ntBASIC4.46□□□□□ -1.7
HIST1H1AQ02539 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 AC107993.1-201ENST00000591343 684 ntBASIC4.46□□□□□ -1.7
HIST1H1AQ02539 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 AC005479.3-201ENST00000602790 431 ntBASIC4.46□□□□□ -1.7
HIST1H1AQ02539 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 AL139407.1-201ENST00000613826 1175 ntBASIC4.46□□□□□ -1.7
HIST1H1AQ02539 AC007786.3-201ENST00000615154 596 ntBASIC4.46□□□□□ -1.7
HIST1H1AQ02539 AC096861.1-201ENST00000616652 240 ntBASIC4.46□□□□□ -1.7
HIST1H1AQ02539 BNIP3P41-202ENST00000616656 861 ntBASIC4.46□□□□□ -1.7
HIST1H1AQ02539 FAM27E2-201ENST00000619668 403 ntBASIC4.46□□□□□ -1.7
HIST1H1AQ02539 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HIST1H1AQ02539 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 DDX18P6-201ENST00000450119 1997 ntBASIC4.45□□□□□ -1.7
HIST1H1AQ02539 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 RNA5SP211-201ENST00000365516 117 ntBASIC4.45□□□□□ -1.7
HIST1H1AQ02539 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 Z82198.3-201ENST00000421145 199 ntBASIC4.45□□□□□ -1.7
HIST1H1AQ02539 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HIST1H1AQ02539 AC099677.3-201ENST00000427081 395 ntBASIC4.45□□□□□ -1.7
HIST1H1AQ02539 CRIP1P1-201ENST00000427567 185 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms