Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.82□□□□□ -1.64
LMO4P61968 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.82□□□□□ -1.64
LMO4P61968 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.82□□□□□ -1.64
LMO4P61968 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.82□□□□□ -1.64
LMO4P61968 AC025423.2-201ENST00000537570 439 ntBASIC4.82□□□□□ -1.64
LMO4P61968 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.82□□□□□ -1.64
LMO4P61968 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.82□□□□□ -1.64
LMO4P61968 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LMO4P61968 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
LMO4P61968 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LMO4P61968 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.82□□□□□ -1.64
LMO4P61968 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.82□□□□□ -1.64
LMO4P61968 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.82□□□□□ -1.64
LMO4P61968 MIR6826-201ENST00000617808 98 ntBASIC4.82□□□□□ -1.64
LMO4P61968 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.82□□□□□ -1.64
LMO4P61968 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC4.82□□□□□ -1.64
LMO4P61968 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LMO4P61968 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LMO4P61968 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC4.82□□□□□ -1.64
LMO4P61968 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LMO4P61968 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC4.82□□□□□ -1.64
LMO4P61968 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC4.82□□□□□ -1.64
LMO4P61968 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LMO4P61968 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LMO4P61968 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LMO4P61968 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC4.82□□□□□ -1.64
LMO4P61968 AC130304.1-201ENST00000622942 2385 ntBASIC4.82□□□□□ -1.64
LMO4P61968 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
LMO4P61968 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.81□□□□□ -1.64
LMO4P61968 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
LMO4P61968 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
LMO4P61968 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMO4P61968 ICE2P1-201ENST00000512800 1849 ntBASIC4.81□□□□□ -1.64
LMO4P61968 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
LMO4P61968 OLMALINC-203ENST00000641087 3779 ntBASIC4.81□□□□□ -1.64
LMO4P61968 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LMO4P61968 AL589993.1-201ENST00000407450 2524 ntBASIC4.81□□□□□ -1.64
LMO4P61968 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LMO4P61968 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LMO4P61968 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.81□□□□□ -1.64
LMO4P61968 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
LMO4P61968 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
LMO4P61968 ZNF812P-201ENST00000457674 1694 ntBASIC4.81□□□□□ -1.64
LMO4P61968 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMO4P61968 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMO4P61968 AC007842.1-201ENST00000597336 2039 ntBASIC4.81□□□□□ -1.64
LMO4P61968 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMO4P61968 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LMO4P61968 AL159987.1-201ENST00000347911 293 ntBASIC4.81□□□□□ -1.64
LMO4P61968 RN7SKP160-201ENST00000363804 340 ntBASIC4.81□□□□□ -1.64
LMO4P61968 AL391422.1-201ENST00000402155 436 ntBASIC4.81□□□□□ -1.64
LMO4P61968 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.81□□□□□ -1.64
LMO4P61968 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.81□□□□□ -1.64
LMO4P61968 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.81□□□□□ -1.64
LMO4P61968 GTF3AP1-201ENST00000416942 1004 ntBASIC4.81□□□□□ -1.64
LMO4P61968 MARK2P12-201ENST00000420129 585 ntBASIC4.81□□□□□ -1.64
LMO4P61968 AC019205.1-201ENST00000421830 730 ntBASIC4.81□□□□□ -1.64
LMO4P61968 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.81□□□□□ -1.64
LMO4P61968 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.81□□□□□ -1.64
LMO4P61968 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.81□□□□□ -1.64
LMO4P61968 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.81□□□□□ -1.64
LMO4P61968 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.81□□□□□ -1.64
LMO4P61968 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.81□□□□□ -1.64
LMO4P61968 TRBV8-1-201ENST00000481590 279 ntBASIC4.81□□□□□ -1.64
LMO4P61968 AL035690.1-201ENST00000490892 383 ntBASIC4.81□□□□□ -1.64
LMO4P61968 RPS4XP14-201ENST00000493072 781 ntBASIC4.81□□□□□ -1.64
LMO4P61968 CAB39P1-201ENST00000502277 460 ntBASIC4.81□□□□□ -1.64
LMO4P61968 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.81□□□□□ -1.64
LMO4P61968 AC138409.2-202ENST00000507274 458 ntBASIC4.81□□□□□ -1.64
LMO4P61968 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
LMO4P61968 AC139365.2-201ENST00000517972 253 ntBASIC4.81□□□□□ -1.64
LMO4P61968 MRPS16P1-201ENST00000523462 412 ntBASIC4.81□□□□□ -1.64
LMO4P61968 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.81□□□□□ -1.64
LMO4P61968 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMO4P61968 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.81□□□□□ -1.64
LMO4P61968 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.81□□□□□ -1.64
LMO4P61968 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.81□□□□□ -1.64
LMO4P61968 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC4.81□□□□□ -1.64
LMO4P61968 MIR4489-201ENST00000578869 62 ntBASIC4.81□□□□□ -1.64
LMO4P61968 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.81□□□□□ -1.64
LMO4P61968 AC007448.1-201ENST00000582714 234 ntBASIC4.81□□□□□ -1.64
LMO4P61968 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC4.81□□□□□ -1.64
LMO4P61968 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC4.81□□□□□ -1.64
LMO4P61968 BNIP3P39-201ENST00000601077 554 ntBASIC4.81□□□□□ -1.64
LMO4P61968 NF1P10-201ENST00000613227 742 ntBASIC4.81□□□□□ -1.64
LMO4P61968 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.81□□□□□ -1.64
LMO4P61968 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.81□□□□□ -1.64
LMO4P61968 AL355974.3-201ENST00000617383 467 ntBASIC4.81□□□□□ -1.64
LMO4P61968 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.81□□□□□ -1.64
LMO4P61968 AC008147.4-201ENST00000617570 1204 ntBASIC4.81□□□□□ -1.64
LMO4P61968 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.81□□□□□ -1.64
LMO4P61968 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
LMO4P61968 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LMO4P61968 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC4.81□□□□□ -1.64
LMO4P61968 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
LMO4P61968 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LMO4P61968 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LMO4P61968 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.81□□□□□ -1.64
LMO4P61968 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.81□□□□□ -1.64
LMO4P61968 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms