Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.85□□□□□ -1.47
SUMO3P55854 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SUMO3P55854 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC5.85□□□□□ -1.47
SUMO3P55854 SEPT7P7-201ENST00000420492 1301 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 RN7SKP184-201ENST00000362348 333 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 RNA5SP85-201ENST00000365378 119 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 AC007618.1-201ENST00000366455 732 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.85□□□□□ -1.47
SUMO3P55854 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.85□□□□□ -1.47
SUMO3P55854 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SUMO3P55854 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 U6.112-201ENST00000384129 70 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 MIR137-201ENST00000385223 102 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 AL360013.1-201ENST00000419031 858 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 AL157884.1-201ENST00000424561 454 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 AL035246.1-201ENST00000433554 1255 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 ARAFP2-201ENST00000440565 559 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.85□□□□□ -1.47
SUMO3P55854 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.85□□□□□ -1.47
SUMO3P55854 EIF2S2P2-201ENST00000447161 982 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.85□□□□□ -1.47
SUMO3P55854 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.85□□□□□ -1.47
SUMO3P55854 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.85□□□□□ -1.47
SUMO3P55854 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.85□□□□□ -1.47
SUMO3P55854 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 RPL12P24-201ENST00000474907 486 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 SNRPCP11-201ENST00000492453 205 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.85□□□□□ -1.47
SUMO3P55854 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SUMO3P55854 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.85□□□□□ -1.47
SUMO3P55854 HPRT1P1-201ENST00000509498 657 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.85□□□□□ -1.47
SUMO3P55854 AC093816.1-201ENST00000515076 913 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 AP005639.1-201ENST00000526939 192 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.85□□□□□ -1.47
SUMO3P55854 TDGP1-201ENST00000543961 1229 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 AC073916.1-201ENST00000545095 130 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.85□□□□□ -1.47
SUMO3P55854 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.85□□□□□ -1.47
SUMO3P55854 MTCYBP23-201ENST00000558717 1102 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.85□□□□□ -1.47
SUMO3P55854 ZNF971P-201ENST00000562068 1249 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.85□□□□□ -1.47
SUMO3P55854 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.85□□□□□ -1.47
SUMO3P55854 MIR212-201ENST00000586026 110 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 AC098935.2-201ENST00000604222 466 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 AC068726.1-201ENST00000610993 341 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 AC097655.1-201ENST00000635075 318 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 OR6C71P-202ENST00000641886 1107 ntBASIC5.85□□□□□ -1.47
SUMO3P55854 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.85□□□□□ -1.47
SUMO3P55854 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SUMO3P55854 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.85□□□□□ -1.47
SUMO3P55854 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.85□□□□□ -1.47
SUMO3P55854 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SUMO3P55854 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.85□□□□□ -1.47
SUMO3P55854 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SUMO3P55854 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.84□□□□□ -1.47
SUMO3P55854 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SUMO3P55854 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SUMO3P55854 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.84□□□□□ -1.47
SUMO3P55854 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
SUMO3P55854 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SUMO3P55854 AC018717.1-201ENST00000457712 1505 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SUMO3P55854 AC090181.3-201ENST00000624777 1514 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 AL353743.3-201ENST00000442109 1468 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.84□□□□□ -1.47
SUMO3P55854 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
SUMO3P55854 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.84□□□□□ -1.47
SUMO3P55854 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
SUMO3P55854 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC5.84□□□□□ -1.47
SUMO3P55854 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SUMO3P55854 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SUMO3P55854 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SUMO3P55854 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.84□□□□□ -1.47
SUMO3P55854 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SUMO3P55854 RNU6-666P-201ENST00000363499 107 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SUMO3P55854 RNU6-244P-201ENST00000391028 104 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 RNU6-932P-201ENST00000391108 106 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 GAPDHP15-201ENST00000398586 975 ntBASIC5.84□□□□□ -1.47
SUMO3P55854 AL034417.1-201ENST00000399343 800 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms