Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.79□□□□□ -1.64
PAX9P55771 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.79□□□□□ -1.64
PAX9P55771 AC107977.1-201ENST00000355745 939 ntBASIC4.79□□□□□ -1.64
PAX9P55771 MIR365B-201ENST00000362317 111 ntBASIC4.79□□□□□ -1.64
PAX9P55771 MIR421-201ENST00000365696 85 ntBASIC4.79□□□□□ -1.64
PAX9P55771 AL157702.1-201ENST00000398764 426 ntBASIC4.79□□□□□ -1.64
PAX9P55771 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PAX9P55771 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PAX9P55771 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PAX9P55771 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.79□□□□□ -1.64
PAX9P55771 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.79□□□□□ -1.64
PAX9P55771 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.79□□□□□ -1.64
PAX9P55771 MTCO1P45-201ENST00000431457 267 ntBASIC4.79□□□□□ -1.64
PAX9P55771 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PAX9P55771 KRTAP2-5P-201ENST00000446109 396 ntBASIC4.79□□□□□ -1.64
PAX9P55771 HIGD1AP16-201ENST00000450986 258 ntBASIC4.79□□□□□ -1.64
PAX9P55771 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC4.79□□□□□ -1.64
PAX9P55771 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.79□□□□□ -1.64
PAX9P55771 RN7SL197P-201ENST00000466981 299 ntBASIC4.79□□□□□ -1.64
PAX9P55771 AP003385.3-201ENST00000472498 287 ntBASIC4.79□□□□□ -1.64
PAX9P55771 RN7SL790P-201ENST00000474043 298 ntBASIC4.79□□□□□ -1.64
PAX9P55771 GM2AP2-201ENST00000491764 562 ntBASIC4.79□□□□□ -1.64
PAX9P55771 AC122714.1-201ENST00000502510 459 ntBASIC4.79□□□□□ -1.64
PAX9P55771 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PAX9P55771 AC025768.1-201ENST00000510057 267 ntBASIC4.79□□□□□ -1.64
PAX9P55771 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.79□□□□□ -1.64
PAX9P55771 RNU2-45P-201ENST00000516068 187 ntBASIC4.79□□□□□ -1.64
PAX9P55771 RNA5SP434-201ENST00000516647 121 ntBASIC4.79□□□□□ -1.64
PAX9P55771 RNA5SP206-201ENST00000516703 121 ntBASIC4.79□□□□□ -1.64
PAX9P55771 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PAX9P55771 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.79□□□□□ -1.64
PAX9P55771 CASP1P2-201ENST00000526830 1258 ntBASIC4.79□□□□□ -1.64
PAX9P55771 OR4A46P-201ENST00000527255 933 ntBASIC4.79□□□□□ -1.64
PAX9P55771 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.79□□□□□ -1.64
PAX9P55771 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.79□□□□□ -1.64
PAX9P55771 AP003049.1-201ENST00000529418 457 ntBASIC4.79□□□□□ -1.64
PAX9P55771 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
PAX9P55771 AC084851.2-201ENST00000530377 364 ntBASIC4.79□□□□□ -1.64
PAX9P55771 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.79□□□□□ -1.64
PAX9P55771 AL121594.2-201ENST00000541658 472 ntBASIC4.79□□□□□ -1.64
PAX9P55771 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.79□□□□□ -1.64
PAX9P55771 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
PAX9P55771 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC4.79□□□□□ -1.64
PAX9P55771 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC4.79□□□□□ -1.64
PAX9P55771 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC4.79□□□□□ -1.64
PAX9P55771 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.79□□□□□ -1.64
PAX9P55771 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.79□□□□□ -1.64
PAX9P55771 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.79□□□□□ -1.64
PAX9P55771 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.79□□□□□ -1.64
PAX9P55771 AL513327.3-201ENST00000602618 469 ntBASIC4.79□□□□□ -1.64
PAX9P55771 AC144521.1-201ENST00000607148 956 ntBASIC4.79□□□□□ -1.64
PAX9P55771 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC4.79□□□□□ -1.64
PAX9P55771 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC4.79□□□□□ -1.64
PAX9P55771 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC4.79□□□□□ -1.64
PAX9P55771 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
PAX9P55771 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PAX9P55771 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PAX9P55771 Z83820.1-201ENST00000456978 1499 ntBASIC4.79□□□□□ -1.64
PAX9P55771 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PAX9P55771 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PAX9P55771 MRRFP1-201ENST00000435941 1675 ntBASIC4.79□□□□□ -1.64
PAX9P55771 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PAX9P55771 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PAX9P55771 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
PAX9P55771 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PAX9P55771 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PAX9P55771 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.78□□□□□ -1.64
PAX9P55771 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PAX9P55771 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.78□□□□□ -1.64
PAX9P55771 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
PAX9P55771 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PAX9P55771 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
PAX9P55771 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PAX9P55771 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PAX9P55771 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PAX9P55771 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PAX9P55771 AP001002.1-201ENST00000625148 1513 ntBASIC4.78□□□□□ -1.64
PAX9P55771 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PAX9P55771 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.78□□□□□ -1.64
PAX9P55771 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
PAX9P55771 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
PAX9P55771 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PAX9P55771 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.78□□□□□ -1.64
PAX9P55771 AC119674.1-202ENST00000641333 1860 ntBASIC4.78□□□□□ -1.64
PAX9P55771 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.78□□□□□ -1.64
PAX9P55771 CR382285.2-201ENST00000624662 1495 ntBASIC4.78□□□□□ -1.64
PAX9P55771 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PAX9P55771 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PAX9P55771 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.78□□□□□ -1.64
PAX9P55771 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PAX9P55771 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
PAX9P55771 SNORD94-201ENST00000386037 137 ntBASIC4.78□□□□□ -1.64
PAX9P55771 AL096829.1-201ENST00000413677 457 ntBASIC4.78□□□□□ -1.64
PAX9P55771 AC073464.3-201ENST00000422564 712 ntBASIC4.78□□□□□ -1.64
PAX9P55771 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.78□□□□□ -1.64
PAX9P55771 MTCO1P51-201ENST00000427672 1060 ntBASIC4.78□□□□□ -1.64
PAX9P55771 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.78□□□□□ -1.64
PAX9P55771 AL645939.3-201ENST00000435408 225 ntBASIC4.78□□□□□ -1.64
PAX9P55771 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.78□□□□□ -1.64
PAX9P55771 GAPDHP37-201ENST00000442317 968 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms