Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIMK1P53667 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIMK1P53667 MIR137-201ENST00000385223 102 ntBASIC6.05□□□□□ -1.44
LIMK1P53667 AL391422.1-201ENST00000402155 436 ntBASIC6.05□□□□□ -1.44
LIMK1P53667 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.05□□□□□ -1.44
LIMK1P53667 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.05□□□□□ -1.44
LIMK1P53667 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.05□□□□□ -1.44
LIMK1P53667 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.05□□□□□ -1.44
LIMK1P53667 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
LIMK1P53667 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.05□□□□□ -1.44
LIMK1P53667 MORF4-201ENST00000447135 971 ntBASIC6.05□□□□□ -1.44
LIMK1P53667 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.05□□□□□ -1.44
LIMK1P53667 AC098583.1-201ENST00000480875 255 ntBASIC6.05□□□□□ -1.44
LIMK1P53667 AC093270.2-201ENST00000486157 792 ntBASIC6.05□□□□□ -1.44
LIMK1P53667 AC093763.2-201ENST00000505334 1223 ntBASIC6.05□□□□□ -1.44
LIMK1P53667 DUTP7-201ENST00000507982 486 ntBASIC6.05□□□□□ -1.44
LIMK1P53667 AC010343.2-201ENST00000510162 224 ntBASIC6.05□□□□□ -1.44
LIMK1P53667 AC074087.1-201ENST00000512059 724 ntBASIC6.05□□□□□ -1.44
LIMK1P53667 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.05□□□□□ -1.44
LIMK1P53667 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.05□□□□□ -1.44
LIMK1P53667 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.05□□□□□ -1.44
LIMK1P53667 AP001858.2-201ENST00000536213 601 ntBASIC6.05□□□□□ -1.44
LIMK1P53667 AL358913.1-201ENST00000554342 121 ntBASIC6.05□□□□□ -1.44
LIMK1P53667 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.05□□□□□ -1.44
LIMK1P53667 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.05□□□□□ -1.44
LIMK1P53667 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
LIMK1P53667 MIR1269B-201ENST00000580405 75 ntBASIC6.05□□□□□ -1.44
LIMK1P53667 MIR4505-201ENST00000582238 73 ntBASIC6.05□□□□□ -1.44
LIMK1P53667 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.05□□□□□ -1.44
LIMK1P53667 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.05□□□□□ -1.44
LIMK1P53667 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.05□□□□□ -1.44
LIMK1P53667 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIMK1P53667 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LIMK1P53667 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIMK1P53667 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIMK1P53667 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIMK1P53667 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.05□□□□□ -1.44
LIMK1P53667 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LIMK1P53667 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.05□□□□□ -1.44
LIMK1P53667 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
LIMK1P53667 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LIMK1P53667 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
LIMK1P53667 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK1P53667 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
LIMK1P53667 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK1P53667 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK1P53667 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
LIMK1P53667 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK1P53667 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
LIMK1P53667 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
LIMK1P53667 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK1P53667 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
LIMK1P53667 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK1P53667 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
LIMK1P53667 LINC02019-201ENST00000608605 2060 ntBASIC6.04□□□□□ -1.44
LIMK1P53667 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK1P53667 RNA5SP46-201ENST00000362370 120 ntBASIC6.04□□□□□ -1.44
LIMK1P53667 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.04□□□□□ -1.44
LIMK1P53667 MIR585-201ENST00000384887 94 ntBASIC6.04□□□□□ -1.44
LIMK1P53667 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.04□□□□□ -1.44
LIMK1P53667 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.04□□□□□ -1.44
LIMK1P53667 BMS1P17-202ENST00000416720 316 ntBASIC6.04□□□□□ -1.44
LIMK1P53667 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
LIMK1P53667 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.04□□□□□ -1.44
LIMK1P53667 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.04□□□□□ -1.44
LIMK1P53667 MORF4L1P4-201ENST00000450245 976 ntBASIC6.04□□□□□ -1.44
LIMK1P53667 GEMIN2P1-201ENST00000454246 752 ntBASIC6.04□□□□□ -1.44
LIMK1P53667 RN7SL329P-201ENST00000467740 299 ntBASIC6.04□□□□□ -1.44
LIMK1P53667 RN7SL826P-201ENST00000479724 288 ntBASIC6.04□□□□□ -1.44
LIMK1P53667 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.04□□□□□ -1.44
LIMK1P53667 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
LIMK1P53667 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.04□□□□□ -1.44
LIMK1P53667 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK1P53667 RN7SKP67-201ENST00000515905 235 ntBASIC6.04□□□□□ -1.44
LIMK1P53667 AC021269.1-201ENST00000526860 705 ntBASIC6.04□□□□□ -1.44
LIMK1P53667 HNRNPRP2-201ENST00000528421 743 ntBASIC6.04□□□□□ -1.44
LIMK1P53667 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.04□□□□□ -1.44
LIMK1P53667 MIR4776-2-201ENST00000580204 80 ntBASIC6.04□□□□□ -1.44
LIMK1P53667 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.04□□□□□ -1.44
LIMK1P53667 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.04□□□□□ -1.44
LIMK1P53667 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.04□□□□□ -1.44
LIMK1P53667 MIR7159-201ENST00000620587 66 ntBASIC6.04□□□□□ -1.44
LIMK1P53667 AC074140.1-201ENST00000621617 208 ntBASIC6.04□□□□□ -1.44
LIMK1P53667 AC243960.7-201ENST00000623532 707 ntBASIC6.04□□□□□ -1.44
LIMK1P53667 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.04□□□□□ -1.44
LIMK1P53667 AC011369.2-201ENST00000624423 1567 ntBASIC6.04□□□□□ -1.44
LIMK1P53667 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.04□□□□□ -1.44
LIMK1P53667 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
LIMK1P53667 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK1P53667 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK1P53667 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK1P53667 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.04□□□□□ -1.44
LIMK1P53667 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.04□□□□□ -1.44
LIMK1P53667 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK1P53667 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LIMK1P53667 AC011455.2-201ENST00000599320 3336 ntBASIC6.04□□□□□ -1.44
LIMK1P53667 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.04□□□□□ -1.44
LIMK1P53667 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK1P53667 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
LIMK1P53667 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms