Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 DDX39BP1-205ENST00000422507 192 ntBASIC9.84□□□□□ -0.83
SMARCA4P51532 AC245028.1-201ENST00000423259 256 ntBASIC9.84□□□□□ -0.83
SMARCA4P51532 TEX41-205ENST00000431734 529 ntTSL 4 BASIC9.84□□□□□ -0.83
SMARCA4P51532 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC9.84□□□□□ -0.83
SMARCA4P51532 RPL5P22-201ENST00000480199 884 ntBASIC9.84□□□□□ -0.83
SMARCA4P51532 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC9.84□□□□□ -0.83
SMARCA4P51532 SLC25A14P1-201ENST00000502867 901 ntBASIC9.84□□□□□ -0.83
SMARCA4P51532 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC9.84□□□□□ -0.83
SMARCA4P51532 PMS2P3-207ENST00000529061 717 ntBASIC9.84□□□□□ -0.83
SMARCA4P51532 MIR4301-201ENST00000577203 66 ntBASIC9.84□□□□□ -0.83
SMARCA4P51532 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC9.84□□□□□ -0.83
SMARCA4P51532 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC9.84□□□□□ -0.83
SMARCA4P51532 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC9.84□□□□□ -0.83
SMARCA4P51532 MAPK10-350ENST00000641777 965 ntBASIC9.84□□□□□ -0.83
SMARCA4P51532 MT-RNR2-201ENST00000387347 1559 ntBASIC9.84□□□□□ -0.83
SMARCA4P51532 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC9.84□□□□□ -0.83
SMARCA4P51532 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
SMARCA4P51532 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SMARCA4P51532 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
SMARCA4P51532 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
SMARCA4P51532 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC9.84□□□□□ -0.84
SMARCA4P51532 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
SMARCA4P51532 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC9.83□□□□□ -0.84
SMARCA4P51532 HSPA8P14-201ENST00000552265 1805 ntBASIC9.83□□□□□ -0.84
SMARCA4P51532 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC9.83□□□□□ -0.84
SMARCA4P51532 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SMARCA4P51532 DPY19L1P1-201ENST00000417811 2594 ntBASIC9.83□□□□□ -0.84
SMARCA4P51532 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SMARCA4P51532 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC9.83□□□□□ -0.84
SMARCA4P51532 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
SMARCA4P51532 AC006058.1-201ENST00000568686 5067 ntBASIC9.83□□□□□ -0.84
SMARCA4P51532 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SMARCA4P51532 DBIP1-201ENST00000401435 260 ntBASIC9.83□□□□□ -0.84
SMARCA4P51532 AC091390.1-201ENST00000433904 331 ntBASIC9.83□□□□□ -0.84
SMARCA4P51532 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC9.83□□□□□ -0.84
SMARCA4P51532 CEACAMP9-201ENST00000442990 513 ntBASIC9.83□□□□□ -0.84
SMARCA4P51532 AL596266.1-201ENST00000448132 400 ntBASIC9.83□□□□□ -0.84
SMARCA4P51532 OSTCP1-201ENST00000455507 450 ntBASIC9.83□□□□□ -0.84
SMARCA4P51532 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SMARCA4P51532 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC9.83□□□□□ -0.84
SMARCA4P51532 AC074050.1-201ENST00000563247 211 ntBASIC9.83□□□□□ -0.84
SMARCA4P51532 AC137695.1-201ENST00000604126 489 ntBASIC9.83□□□□□ -0.84
SMARCA4P51532 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SMARCA4P51532 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC9.83□□□□□ -0.84
SMARCA4P51532 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
SMARCA4P51532 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SMARCA4P51532 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
SMARCA4P51532 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
SMARCA4P51532 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
SMARCA4P51532 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SMARCA4P51532 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SMARCA4P51532 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC9.83□□□□□ -0.84
SMARCA4P51532 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SMARCA4P51532 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
SMARCA4P51532 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
SMARCA4P51532 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
SMARCA4P51532 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SMARCA4P51532 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SMARCA4P51532 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SMARCA4P51532 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC9.82□□□□□ -0.84
SMARCA4P51532 AL451063.1-201ENST00000450164 1133 ntBASIC9.82□□□□□ -0.84
SMARCA4P51532 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC9.82□□□□□ -0.84
SMARCA4P51532 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC9.82□□□□□ -0.84
SMARCA4P51532 AC009117.1-201ENST00000563948 554 ntBASIC9.82□□□□□ -0.84
SMARCA4P51532 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC9.82□□□□□ -0.84
SMARCA4P51532 MIR4691-201ENST00000583764 85 ntBASIC9.82□□□□□ -0.84
SMARCA4P51532 AC093799.2-201ENST00000610062 578 ntBASIC9.82□□□□□ -0.84
SMARCA4P51532 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC9.82□□□□□ -0.84
SMARCA4P51532 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
SMARCA4P51532 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SMARCA4P51532 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
SMARCA4P51532 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
SMARCA4P51532 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SMARCA4P51532 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SMARCA4P51532 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SMARCA4P51532 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC9.82□□□□□ -0.84
SMARCA4P51532 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
SMARCA4P51532 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SMARCA4P51532 AC083899.1-201ENST00000454465 3819 ntBASIC9.82□□□□□ -0.84
SMARCA4P51532 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SMARCA4P51532 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SMARCA4P51532 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC9.82□□□□□ -0.84
SMARCA4P51532 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SMARCA4P51532 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC9.82□□□□□ -0.84
SMARCA4P51532 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
SMARCA4P51532 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
SMARCA4P51532 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC9.82□□□□□ -0.84
SMARCA4P51532 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC9.82□□□□□ -0.84
SMARCA4P51532 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
SMARCA4P51532 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
SMARCA4P51532 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SMARCA4P51532 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC9.82□□□□□ -0.84
SMARCA4P51532 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
SMARCA4P51532 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SMARCA4P51532 PABPC1P8-201ENST00000452851 2086 ntBASIC9.82□□□□□ -0.84
SMARCA4P51532 MIR192-201ENST00000384915 110 ntBASIC9.82□□□□□ -0.84
SMARCA4P51532 ATP6V1G1P7-201ENST00000415853 349 ntBASIC9.82□□□□□ -0.84
SMARCA4P51532 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC9.82□□□□□ -0.84
SMARCA4P51532 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SMARCA4P51532 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC9.82□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms