Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
POLR2AP24928 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
POLR2AP24928 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
POLR2AP24928 HSPA8P18-201ENST00000439846 1928 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
POLR2AP24928 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
POLR2AP24928 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
POLR2AP24928 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
POLR2AP24928 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
POLR2AP24928 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
POLR2AP24928 AC009804.1-201ENST00000400949 179 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 RMRPP5-201ENST00000411156 267 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.75□□□□□ -1.33
POLR2AP24928 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.75□□□□□ -1.33
POLR2AP24928 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
POLR2AP24928 AL513343.1-201ENST00000451818 792 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
POLR2AP24928 RNU6-415P-201ENST00000516252 97 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.75□□□□□ -1.33
POLR2AP24928 AC007494.1-201ENST00000562293 760 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
POLR2AP24928 MRPS21P7-201ENST00000566937 238 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 AC012616.1-201ENST00000600294 197 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 BX322635.1-201ENST00000605804 496 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 AL356490.1-201ENST00000623079 479 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 AL356863.1-201ENST00000623378 1080 ntBASIC6.75□□□□□ -1.33
POLR2AP24928 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.75□□□□□ -1.33
POLR2AP24928 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
POLR2AP24928 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
POLR2AP24928 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
POLR2AP24928 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.74□□□□□ -1.33
POLR2AP24928 AL133243.4-201ENST00000623116 3109 ntBASIC6.74□□□□□ -1.33
POLR2AP24928 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
POLR2AP24928 AC011379.1-201ENST00000508713 3025 ntBASIC6.74□□□□□ -1.33
POLR2AP24928 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
POLR2AP24928 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.74□□□□□ -1.33
POLR2AP24928 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
POLR2AP24928 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
POLR2AP24928 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
POLR2AP24928 MTCO1P4-201ENST00000520516 1409 ntBASIC6.74□□□□□ -1.33
POLR2AP24928 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.74□□□□□ -1.33
POLR2AP24928 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
POLR2AP24928 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.74□□□□□ -1.33
POLR2AP24928 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
POLR2AP24928 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.74□□□□□ -1.33
POLR2AP24928 UBE2V1P6-201ENST00000430840 422 ntBASIC6.74□□□□□ -1.33
POLR2AP24928 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.74□□□□□ -1.33
POLR2AP24928 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC6.74□□□□□ -1.33
POLR2AP24928 AL606490.8-201ENST00000441624 319 ntBASIC6.74□□□□□ -1.33
POLR2AP24928 MTATP6P26-201ENST00000445926 662 ntBASIC6.74□□□□□ -1.33
POLR2AP24928 RPL7P61-201ENST00000451721 751 ntBASIC6.74□□□□□ -1.33
POLR2AP24928 MTND6P32-201ENST00000457611 483 ntBASIC6.74□□□□□ -1.33
POLR2AP24928 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.74□□□□□ -1.33
POLR2AP24928 AC090638.1-201ENST00000498296 909 ntBASIC6.74□□□□□ -1.33
POLR2AP24928 RNU6-941P-201ENST00000516346 108 ntBASIC6.74□□□□□ -1.33
POLR2AP24928 AC022832.1-201ENST00000530718 645 ntBASIC6.74□□□□□ -1.33
POLR2AP24928 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.74□□□□□ -1.33
POLR2AP24928 AC090424.1-201ENST00000535243 736 ntBASIC6.74□□□□□ -1.33
POLR2AP24928 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.74□□□□□ -1.33
POLR2AP24928 AL049872.1-201ENST00000556323 322 ntBASIC6.74□□□□□ -1.33
POLR2AP24928 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.74□□□□□ -1.33
POLR2AP24928 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.74□□□□□ -1.33
POLR2AP24928 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.74□□□□□ -1.33
POLR2AP24928 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.74□□□□□ -1.33
POLR2AP24928 AC012557.1-201ENST00000607115 611 ntBASIC6.74□□□□□ -1.33
POLR2AP24928 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.74□□□□□ -1.33
POLR2AP24928 uc_338.18-201ENST00000615451 175 ntBASIC6.74□□□□□ -1.33
POLR2AP24928 AC243960.7-201ENST00000623532 707 ntBASIC6.74□□□□□ -1.33
POLR2AP24928 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
POLR2AP24928 UG0898H09-202ENST00000623646 7040 ntBASIC6.74□□□□□ -1.33
POLR2AP24928 AL121768.1-201ENST00000613917 2544 ntBASIC6.74□□□□□ -1.33
POLR2AP24928 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
POLR2AP24928 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
POLR2AP24928 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
POLR2AP24928 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
POLR2AP24928 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.74□□□□□ -1.33
POLR2AP24928 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
POLR2AP24928 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
POLR2AP24928 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
POLR2AP24928 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.73□□□□□ -1.33
POLR2AP24928 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
POLR2AP24928 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
POLR2AP24928 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
POLR2AP24928 AL357752.1-201ENST00000412817 349 ntBASIC6.73□□□□□ -1.33
POLR2AP24928 NIFKP3-201ENST00000417799 865 ntBASIC6.73□□□□□ -1.33
POLR2AP24928 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.73□□□□□ -1.33
POLR2AP24928 DSTNP5-201ENST00000427921 523 ntBASIC6.73□□□□□ -1.33
POLR2AP24928 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.73□□□□□ -1.33
POLR2AP24928 RPL21P133-201ENST00000443666 476 ntBASIC6.73□□□□□ -1.33
POLR2AP24928 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC6.73□□□□□ -1.33
POLR2AP24928 AC068587.2-201ENST00000478386 781 ntBASIC6.73□□□□□ -1.33
POLR2AP24928 RN7SL459P-201ENST00000481078 302 ntBASIC6.73□□□□□ -1.33
POLR2AP24928 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
POLR2AP24928 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC6.73□□□□□ -1.33
POLR2AP24928 CR383656.14-201ENST00000551951 406 ntBASIC6.73□□□□□ -1.33
POLR2AP24928 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC6.73□□□□□ -1.33
POLR2AP24928 AC008507.2-201ENST00000588402 1176 ntBASIC6.73□□□□□ -1.33
POLR2AP24928 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.73□□□□□ -1.33
POLR2AP24928 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.73□□□□□ -1.33
POLR2AP24928 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms