Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL590128.1-201ENST00000433407 286 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.56□□□□□ -1.36
COL6A2P12110 EEF1A1P39-201ENST00000440791 250 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 EXTL2P1-201ENST00000446218 416 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 AC069540.1-201ENST00000446320 988 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.56□□□□□ -1.36
COL6A2P12110 OTX2P1-201ENST00000450956 354 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.56□□□□□ -1.36
COL6A2P12110 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.56□□□□□ -1.36
COL6A2P12110 RN7SL390P-201ENST00000470634 284 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 RPL5P15-201ENST00000475870 897 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 OR2A20P-203ENST00000498397 1268 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.56□□□□□ -1.36
COL6A2P12110 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL6A2P12110 AC010442.1-201ENST00000515583 816 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 RN7SKP34-201ENST00000516142 244 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 RNA5SP303-201ENST00000516192 130 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.56□□□□□ -1.36
COL6A2P12110 SNRPCP6-201ENST00000528310 210 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 HNRNPCP8-201ENST00000528764 888 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC6.56□□□□□ -1.36
COL6A2P12110 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC6.56□□□□□ -1.36
COL6A2P12110 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.56□□□□□ -1.36
COL6A2P12110 AP003115.1-201ENST00000569849 463 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 MIR744-201ENST00000578242 98 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.56□□□□□ -1.36
COL6A2P12110 AC024451.4-201ENST00000602578 752 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 AL035417.2-201ENST00000603887 796 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 AL356986.1-201ENST00000604085 341 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.56□□□□□ -1.36
COL6A2P12110 AC018638.7-201ENST00000605836 1114 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL6A2P12110 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.56□□□□□ -1.36
COL6A2P12110 AC131159.1-201ENST00000621854 213 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.56□□□□□ -1.36
COL6A2P12110 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.56□□□□□ -1.36
COL6A2P12110 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC6.56□□□□□ -1.36
COL6A2P12110 AC243725.1-201ENST00000637164 436 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 MIR1322-201ENST00000638013 71 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
COL6A2P12110 AL121936.2-201ENST00000641935 662 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.56□□□□□ -1.36
COL6A2P12110 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
COL6A2P12110 TMCC1P1-201ENST00000518897 1980 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 AL133268.1-201ENST00000405676 1401 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.56□□□□□ -1.36
COL6A2P12110 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL6A2P12110 AC110373.1-201ENST00000505994 3505 ntBASIC6.56□□□□□ -1.36
COL6A2P12110 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.56□□□□□ -1.36
COL6A2P12110 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL6A2P12110 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL6A2P12110 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL6A2P12110 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL6A2P12110 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC6.55□□□□□ -1.36
COL6A2P12110 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.55□□□□□ -1.36
COL6A2P12110 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
COL6A2P12110 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL6A2P12110 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL6A2P12110 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
COL6A2P12110 AC006213.6-201ENST00000623722 4179 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL6A2P12110 SNORD113-6-201ENST00000363345 75 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.55□□□□□ -1.36
COL6A2P12110 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.55□□□□□ -1.36
COL6A2P12110 AL356320.2-201ENST00000417263 507 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 NENFP1-201ENST00000419476 466 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC6.55□□□□□ -1.36
COL6A2P12110 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.55□□□□□ -1.36
COL6A2P12110 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.55□□□□□ -1.36
COL6A2P12110 KCTD10P1-201ENST00000434203 625 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 RPL14P5-201ENST00000436474 730 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC6.55□□□□□ -1.36
COL6A2P12110 HMGB3P6-201ENST00000444896 598 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 MTCO2P7-201ENST00000446518 666 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 TRY2P-201ENST00000448860 689 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 MYO5BP2-201ENST00000449815 1277 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 OR7E7P-201ENST00000455678 1012 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 GTF2IP12-201ENST00000456547 356 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 CTSLP6-201ENST00000458273 1002 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 AC005410.1-202ENST00000460347 485 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 AC091849.1-201ENST00000509920 121 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 AC008837.1-201ENST00000511513 412 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC6.55□□□□□ -1.36
COL6A2P12110 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.55□□□□□ -1.36
COL6A2P12110 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.55□□□□□ -1.36
COL6A2P12110 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC6.55□□□□□ -1.36
COL6A2P12110 AL121839.1-201ENST00000556233 1185 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 OR4C49P-201ENST00000563891 900 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 AP006587.6-201ENST00000582128 1091 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 AC090774.2-201ENST00000584708 322 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 AC015802.2-201ENST00000589690 189 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.55□□□□□ -1.36
COL6A2P12110 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.55□□□□□ -1.36
COL6A2P12110 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC6.55□□□□□ -1.36
COL6A2P12110 BUB1P1-201ENST00000603541 607 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 AC010245.2-201ENST00000606908 1167 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.55□□□□□ -1.36
COL6A2P12110 TUSC7.1-201ENST00000610969 165 ntBASIC6.55□□□□□ -1.36
COL6A2P12110 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.55□□□□□ -1.36
COL6A2P12110 AC013562.2-201ENST00000611632 603 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms