Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
SFTPBP07988 AC092642.1-201ENST00000392417 425 ntBASIC5.2□□□□□ -1.58
SFTPBP07988 OR7E156P-201ENST00000400303 464 ntBASIC5.2□□□□□ -1.58
SFTPBP07988 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.2□□□□□ -1.58
SFTPBP07988 SEPT7P8-201ENST00000413308 775 ntBASIC5.2□□□□□ -1.58
SFTPBP07988 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.2□□□□□ -1.58
SFTPBP07988 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.2□□□□□ -1.58
SFTPBP07988 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.2□□□□□ -1.58
SFTPBP07988 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.2□□□□□ -1.58
SFTPBP07988 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.2□□□□□ -1.58
SFTPBP07988 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SFTPBP07988 AC079807.1-201ENST00000429993 481 ntBASIC5.2□□□□□ -1.58
SFTPBP07988 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.2□□□□□ -1.58
SFTPBP07988 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.2□□□□□ -1.58
SFTPBP07988 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.2□□□□□ -1.58
SFTPBP07988 HIGD1AP16-201ENST00000450986 258 ntBASIC5.2□□□□□ -1.58
SFTPBP07988 RN7SL254P-201ENST00000460609 284 ntBASIC5.2□□□□□ -1.58
SFTPBP07988 AP002884.1-201ENST00000479691 655 ntBASIC5.2□□□□□ -1.58
SFTPBP07988 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SFTPBP07988 AC108103.1-201ENST00000511286 446 ntBASIC5.2□□□□□ -1.58
SFTPBP07988 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.2□□□□□ -1.58
SFTPBP07988 TPM3P3-201ENST00000521343 354 ntBASIC5.2□□□□□ -1.58
SFTPBP07988 IGKV2-4-201ENST00000523070 340 ntBASIC5.2□□□□□ -1.58
SFTPBP07988 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.2□□□□□ -1.58
SFTPBP07988 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.2□□□□□ -1.58
SFTPBP07988 AC005363.1-201ENST00000530779 351 ntBASIC5.2□□□□□ -1.58
SFTPBP07988 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.2□□□□□ -1.58
SFTPBP07988 AC026826.3-201ENST00000561747 158 ntBASIC5.2□□□□□ -1.58
SFTPBP07988 AC002310.3-201ENST00000569728 723 ntBASIC5.2□□□□□ -1.58
SFTPBP07988 AC134669.1-201ENST00000581275 672 ntBASIC5.2□□□□□ -1.58
SFTPBP07988 AC141002.1-201ENST00000607025 279 ntBASIC5.2□□□□□ -1.58
SFTPBP07988 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.2□□□□□ -1.58
SFTPBP07988 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SFTPBP07988 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SFTPBP07988 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SFTPBP07988 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SFTPBP07988 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SFTPBP07988 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SFTPBP07988 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.2□□□□□ -1.58
SFTPBP07988 AC092451.3-201ENST00000625067 1343 ntBASIC5.2□□□□□ -1.58
SFTPBP07988 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SFTPBP07988 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.19□□□□□ -1.58
SFTPBP07988 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.19□□□□□ -1.58
SFTPBP07988 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SFTPBP07988 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SFTPBP07988 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SFTPBP07988 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.19□□□□□ -1.58
SFTPBP07988 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.19□□□□□ -1.58
SFTPBP07988 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.19□□□□□ -1.58
SFTPBP07988 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.19□□□□□ -1.58
SFTPBP07988 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.19□□□□□ -1.58
SFTPBP07988 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SFTPBP07988 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SFTPBP07988 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SFTPBP07988 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
SFTPBP07988 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.19□□□□□ -1.58
SFTPBP07988 RNA5SP375-201ENST00000362975 119 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 SNORD1C-201ENST00000363315 78 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 RN7SKP269-201ENST00000365545 319 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.19□□□□□ -1.58
SFTPBP07988 PTCD2P2-201ENST00000415579 1095 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.19□□□□□ -1.58
SFTPBP07988 DPPA2P2-201ENST00000418220 897 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 AC009506.2-201ENST00000420635 840 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.19□□□□□ -1.58
SFTPBP07988 IGLV3-4-201ENST00000432300 244 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 PSMD10P2-201ENST00000432890 672 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 Z85994.2-201ENST00000434327 452 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 XKRYP6-201ENST00000440468 1116 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 XKRYP3-201ENST00000442113 1116 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.19□□□□□ -1.58
SFTPBP07988 HMGB1P7-201ENST00000450921 612 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.19□□□□□ -1.58
SFTPBP07988 RN7SL352P-201ENST00000466002 277 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.19□□□□□ -1.58
SFTPBP07988 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.19□□□□□ -1.58
SFTPBP07988 AC091544.1-201ENST00000484702 348 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 RPL12P30-201ENST00000488389 499 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 AP002453.1-201ENST00000492327 668 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.19□□□□□ -1.58
SFTPBP07988 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.19□□□□□ -1.58
SFTPBP07988 AC006512.2-201ENST00000543250 486 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.19□□□□□ -1.58
SFTPBP07988 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.19□□□□□ -1.58
SFTPBP07988 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.19□□□□□ -1.58
SFTPBP07988 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.19□□□□□ -1.58
SFTPBP07988 LSM1P2-201ENST00000604911 322 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 BNIP3P7-201ENST00000605641 516 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.19□□□□□ -1.58
SFTPBP07988 AP001962.1-201ENST00000624114 559 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.19□□□□□ -1.58
SFTPBP07988 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.19□□□□□ -1.58
SFTPBP07988 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.19□□□□□ -1.58
SFTPBP07988 IFIT1P1-201ENST00000400497 1449 ntBASIC5.19□□□□□ -1.58
SFTPBP07988 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SFTPBP07988 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SFTPBP07988 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.19□□□□□ -1.58
SFTPBP07988 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SFTPBP07988 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms