Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC068287.1-201ENST00000430283 295 ntBASIC3.37□□□□□ -1.87
APOBP04114 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC3.37□□□□□ -1.87
APOBP04114 RN7SL604P-201ENST00000492589 296 ntBASIC3.37□□□□□ -1.87
APOBP04114 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC3.37□□□□□ -1.87
APOBP04114 AC005084.1-201ENST00000605160 304 ntBASIC3.37□□□□□ -1.87
APOBP04114 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC3.37□□□□□ -1.87
APOBP04114 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
APOBP04114 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC3.37□□□□□ -1.87
APOBP04114 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 THAP12P4-201ENST00000528321 2266 ntBASIC3.37□□□□□ -1.87
APOBP04114 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
APOBP04114 ERG-210ENST00000442448 5034 ntTSL 5 BASIC3.37□□□□□ -1.87
APOBP04114 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC3.37□□□□□ -1.87
APOBP04114 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC3.37□□□□□ -1.87
APOBP04114 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.37□□□□□ -1.87
APOBP04114 MIR1182-201ENST00000408363 97 ntBASIC3.37□□□□□ -1.87
APOBP04114 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.37□□□□□ -1.87
APOBP04114 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.37□□□□□ -1.87
APOBP04114 RN7SL205P-201ENST00000490174 284 ntBASIC3.37□□□□□ -1.87
APOBP04114 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.37□□□□□ -1.87
APOBP04114 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC3.37□□□□□ -1.87
APOBP04114 NPM1P42-201ENST00000560329 862 ntBASIC3.37□□□□□ -1.87
APOBP04114 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.37□□□□□ -1.87
APOBP04114 RN7SL52P-201ENST00000584271 284 ntBASIC3.37□□□□□ -1.87
APOBP04114 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.37□□□□□ -1.87
APOBP04114 AL445423.1-201ENST00000609941 536 ntBASIC3.37□□□□□ -1.87
APOBP04114 RN7SL722P-201ENST00000617780 284 ntBASIC3.37□□□□□ -1.87
APOBP04114 RN7SL565P-201ENST00000618246 284 ntBASIC3.37□□□□□ -1.87
APOBP04114 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 AC007614.5-201ENST00000623424 8892 ntBASIC3.37□□□□□ -1.87
APOBP04114 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 AC013268.3-201ENST00000262716 2324 ntBASIC3.37□□□□□ -1.87
APOBP04114 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
APOBP04114 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 DMBT1-202ENST00000338354 7686 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 DMBT1-204ENST00000368909 7686 ntAPPRIS P4 TSL 5 BASIC3.37□□□□□ -1.87
APOBP04114 DMBT1-207ENST00000619379 7686 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
APOBP04114 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC3.37□□□□□ -1.87
APOBP04114 AC100871.1-201ENST00000507871 1456 ntBASIC3.37□□□□□ -1.87
APOBP04114 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC3.37□□□□□ -1.87
APOBP04114 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
APOBP04114 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
APOBP04114 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
APOBP04114 EEF1A1P1-201ENST00000447052 739 ntBASIC3.37□□□□□ -1.87
APOBP04114 RPS17P2-201ENST00000461663 408 ntBASIC3.37□□□□□ -1.87
APOBP04114 AC005000.1-201ENST00000536192 288 ntBASIC3.37□□□□□ -1.87
APOBP04114 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC3.37□□□□□ -1.87
APOBP04114 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC3.37□□□□□ -1.87
APOBP04114 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 RUNX1T1-252ENST00000617740 7627 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
APOBP04114 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 TACC2-210ENST00000369005 9673 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 PDPR-201ENST00000288050 9255 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 RNA5SP388-201ENST00000362584 119 ntBASIC3.37□□□□□ -1.87
APOBP04114 RPL17P50-201ENST00000396131 546 ntBASIC3.37□□□□□ -1.87
APOBP04114 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC3.37□□□□□ -1.87
APOBP04114 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.37□□□□□ -1.87
APOBP04114 AL022319.1-201ENST00000458183 1167 ntBASIC3.37□□□□□ -1.87
APOBP04114 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC3.37□□□□□ -1.87
APOBP04114 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC3.37□□□□□ -1.87
APOBP04114 RN7SKP288-201ENST00000516227 268 ntBASIC3.37□□□□□ -1.87
APOBP04114 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.37□□□□□ -1.87
APOBP04114 OR5M2P-201ENST00000529003 936 ntBASIC3.37□□□□□ -1.87
APOBP04114 YWHABP2-201ENST00000540201 713 ntBASIC3.37□□□□□ -1.87
APOBP04114 AC008147.3-201ENST00000548666 354 ntBASIC3.37□□□□□ -1.87
APOBP04114 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC3.37□□□□□ -1.87
APOBP04114 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC3.37□□□□□ -1.87
APOBP04114 MIR4270-201ENST00000581799 70 ntBASIC3.37□□□□□ -1.87
APOBP04114 AC027334.1-201ENST00000603257 310 ntBASIC3.37□□□□□ -1.87
APOBP04114 AC005377.1-201ENST00000605126 456 ntBASIC3.37□□□□□ -1.87
APOBP04114 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 MT-RNR2-201ENST00000387347 1559 ntBASIC3.37□□□□□ -1.87
APOBP04114 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.37□□□□□ -1.87
APOBP04114 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
APOBP04114 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
APOBP04114 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
APOBP04114 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
APOBP04114 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC3.37□□□□□ -1.87
APOBP04114 MAK-202ENST00000354489 3941 ntTSL 5 BASIC3.36□□□□□ -1.87
APOBP04114 RNU4-2-201ENST00000365668 141 ntBASIC3.36□□□□□ -1.87
APOBP04114 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC3.36□□□□□ -1.87
APOBP04114 CDC123-202ENST00000378900 933 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms