Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC068870.1-201ENST00000563737 2455 ntBASIC5.41□□□□□ -1.54
MT-ND1P03886 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
MT-ND1P03886 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.41□□□□□ -1.54
MT-ND1P03886 CASC19-238ENST00000641523 1558 ntBASIC5.41□□□□□ -1.54
MT-ND1P03886 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
MT-ND1P03886 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
MT-ND1P03886 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
MT-ND1P03886 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
MT-ND1P03886 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
MT-ND1P03886 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
MT-ND1P03886 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
MT-ND1P03886 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.4□□□□□ -1.54
MT-ND1P03886 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
MT-ND1P03886 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
MT-ND1P03886 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
MT-ND1P03886 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
MT-ND1P03886 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
MT-ND1P03886 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
MT-ND1P03886 AP000473.2-201ENST00000602659 1537 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
MT-ND1P03886 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.4□□□□□ -1.54
MT-ND1P03886 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.4□□□□□ -1.54
MT-ND1P03886 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
MT-ND1P03886 RNU1-136P-201ENST00000384181 164 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 RN7SKP146-201ENST00000410242 334 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.4□□□□□ -1.54
MT-ND1P03886 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.4□□□□□ -1.54
MT-ND1P03886 AC092865.3-201ENST00000425390 1026 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 RPSAP65-201ENST00000429660 595 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.4□□□□□ -1.54
MT-ND1P03886 AL445928.1-201ENST00000435545 222 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 AC015983.1-201ENST00000441577 373 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
MT-ND1P03886 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.4□□□□□ -1.54
MT-ND1P03886 RNU1-88P-201ENST00000459274 128 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 AC016687.1-201ENST00000482574 353 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.4□□□□□ -1.54
MT-ND1P03886 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.4□□□□□ -1.54
MT-ND1P03886 AC105384.2-201ENST00000508433 640 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 GUSBP9-201ENST00000510138 584 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.4□□□□□ -1.54
MT-ND1P03886 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.4□□□□□ -1.54
MT-ND1P03886 HMGN1P17-201ENST00000513734 295 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.4□□□□□ -1.54
MT-ND1P03886 AC110056.1-201ENST00000525759 911 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.4□□□□□ -1.54
MT-ND1P03886 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.4□□□□□ -1.54
MT-ND1P03886 AC008126.1-201ENST00000549019 480 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.4□□□□□ -1.54
MT-ND1P03886 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.4□□□□□ -1.54
MT-ND1P03886 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.4□□□□□ -1.54
MT-ND1P03886 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.4□□□□□ -1.54
MT-ND1P03886 MRPS21P8-201ENST00000569196 235 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 RN7SL230P-201ENST00000580835 303 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 VN1R81P-201ENST00000602085 372 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.4□□□□□ -1.54
MT-ND1P03886 AC073389.3-201ENST00000609434 935 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 OR8G7P-201ENST00000616658 848 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 AL512652.1-201ENST00000619006 500 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
MT-ND1P03886 AL035661.1-201ENST00000620459 1144 ntBASIC5.4□□□□□ -1.54
MT-ND1P03886 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.4□□□□□ -1.54
MT-ND1P03886 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.4□□□□□ -1.54
MT-ND1P03886 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.4□□□□□ -1.54
MT-ND1P03886 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
MT-ND1P03886 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.4□□□□□ -1.55
MT-ND1P03886 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
MT-ND1P03886 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
MT-ND1P03886 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
MT-ND1P03886 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.4□□□□□ -1.55
MT-ND1P03886 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
MT-ND1P03886 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
MT-ND1P03886 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
MT-ND1P03886 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
MT-ND1P03886 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.4□□□□□ -1.55
MT-ND1P03886 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
MT-ND1P03886 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.39□□□□□ -1.55
MT-ND1P03886 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.39□□□□□ -1.55
MT-ND1P03886 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.39□□□□□ -1.55
MT-ND1P03886 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.39□□□□□ -1.55
MT-ND1P03886 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MT-ND1P03886 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MT-ND1P03886 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MT-ND1P03886 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MT-ND1P03886 RNA5SP326-201ENST00000363209 110 ntBASIC5.39□□□□□ -1.55
MT-ND1P03886 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
MT-ND1P03886 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MT-ND1P03886 AL034417.1-201ENST00000399343 800 ntBASIC5.39□□□□□ -1.55
MT-ND1P03886 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.39□□□□□ -1.55
MT-ND1P03886 AC096921.1-201ENST00000411661 375 ntBASIC5.39□□□□□ -1.55
MT-ND1P03886 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.39□□□□□ -1.55
MT-ND1P03886 AL035422.1-201ENST00000414193 397 ntBASIC5.39□□□□□ -1.55
MT-ND1P03886 AC079809.1-201ENST00000415468 276 ntBASIC5.39□□□□□ -1.55
MT-ND1P03886 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.39□□□□□ -1.55
MT-ND1P03886 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.39□□□□□ -1.55
MT-ND1P03886 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.39□□□□□ -1.55
MT-ND1P03886 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.39□□□□□ -1.55
MT-ND1P03886 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.39□□□□□ -1.55
MT-ND1P03886 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms