Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 BX323845.3-201ENST00000428215 527 ntBASIC6.09□□□□□ -1.43
APOEP02649 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.09□□□□□ -1.43
APOEP02649 RPL12P11-201ENST00000439970 501 ntBASIC6.09□□□□□ -1.43
APOEP02649 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.09□□□□□ -1.43
APOEP02649 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
APOEP02649 AP006222.1-205ENST00000450734 457 ntBASIC6.09□□□□□ -1.43
APOEP02649 AC144530.1-201ENST00000452862 555 ntBASIC6.09□□□□□ -1.43
APOEP02649 OSTCP1-201ENST00000455507 450 ntBASIC6.09□□□□□ -1.43
APOEP02649 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.09□□□□□ -1.43
APOEP02649 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.09□□□□□ -1.43
APOEP02649 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.09□□□□□ -1.43
APOEP02649 NPM1P5-201ENST00000557228 838 ntBASIC6.09□□□□□ -1.43
APOEP02649 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.09□□□□□ -1.43
APOEP02649 AC016839.1-201ENST00000578162 867 ntBASIC6.09□□□□□ -1.43
APOEP02649 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.09□□□□□ -1.43
APOEP02649 AC100767.2-201ENST00000604840 693 ntBASIC6.09□□□□□ -1.43
APOEP02649 AL355974.3-201ENST00000617383 467 ntBASIC6.09□□□□□ -1.43
APOEP02649 OR11H2-202ENST00000641517 1085 ntBASIC6.09□□□□□ -1.43
APOEP02649 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
APOEP02649 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
APOEP02649 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
APOEP02649 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
APOEP02649 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
APOEP02649 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
APOEP02649 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.09□□□□□ -1.43
APOEP02649 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
APOEP02649 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
APOEP02649 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.08□□□□□ -1.44
APOEP02649 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
APOEP02649 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
APOEP02649 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
APOEP02649 AP001157.1-201ENST00000550837 2339 ntBASIC6.08□□□□□ -1.44
APOEP02649 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
APOEP02649 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
APOEP02649 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
APOEP02649 RNA5SP510-201ENST00000364697 99 ntBASIC6.08□□□□□ -1.44
APOEP02649 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.08□□□□□ -1.44
APOEP02649 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.08□□□□□ -1.44
APOEP02649 RPS12P17-201ENST00000438591 377 ntBASIC6.08□□□□□ -1.44
APOEP02649 AL512637.1-201ENST00000439523 1231 ntBASIC6.08□□□□□ -1.44
APOEP02649 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.08□□□□□ -1.44
APOEP02649 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.08□□□□□ -1.44
APOEP02649 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
APOEP02649 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.08□□□□□ -1.44
APOEP02649 AC093166.4-201ENST00000457867 318 ntBASIC6.08□□□□□ -1.44
APOEP02649 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
APOEP02649 AC079080.1-201ENST00000479841 822 ntBASIC6.08□□□□□ -1.44
APOEP02649 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.08□□□□□ -1.44
APOEP02649 MIR2117-201ENST00000516780 80 ntBASIC6.08□□□□□ -1.44
APOEP02649 SNORA70.20-201ENST00000516848 126 ntBASIC6.08□□□□□ -1.44
APOEP02649 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.08□□□□□ -1.44
APOEP02649 HMGN2P36-201ENST00000529541 409 ntBASIC6.08□□□□□ -1.44
APOEP02649 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.08□□□□□ -1.44
APOEP02649 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.08□□□□□ -1.44
APOEP02649 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.08□□□□□ -1.44
APOEP02649 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.08□□□□□ -1.44
APOEP02649 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
APOEP02649 MIR4310-201ENST00000582950 57 ntBASIC6.08□□□□□ -1.44
APOEP02649 MIR4260-201ENST00000583107 67 ntBASIC6.08□□□□□ -1.44
APOEP02649 AP001357.1-201ENST00000586304 1053 ntBASIC6.08□□□□□ -1.44
APOEP02649 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.08□□□□□ -1.44
APOEP02649 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.08□□□□□ -1.44
APOEP02649 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
APOEP02649 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
APOEP02649 AC000095.2-202ENST00000637415 154 ntBASIC6.08□□□□□ -1.44
APOEP02649 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
APOEP02649 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
APOEP02649 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
APOEP02649 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
APOEP02649 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
APOEP02649 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.08□□□□□ -1.44
APOEP02649 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
APOEP02649 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.08□□□□□ -1.44
APOEP02649 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
APOEP02649 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
APOEP02649 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
APOEP02649 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
APOEP02649 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
APOEP02649 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
APOEP02649 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
APOEP02649 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
APOEP02649 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
APOEP02649 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
APOEP02649 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
APOEP02649 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
APOEP02649 RNA5SP500-201ENST00000364486 119 ntBASIC6.07□□□□□ -1.44
APOEP02649 RN7SKP15-201ENST00000364742 309 ntBASIC6.07□□□□□ -1.44
APOEP02649 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
APOEP02649 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
APOEP02649 RPS3AP2-201ENST00000407190 754 ntBASIC6.07□□□□□ -1.44
APOEP02649 RN7SKP17-201ENST00000411242 351 ntBASIC6.07□□□□□ -1.44
APOEP02649 AC245060.4-201ENST00000413293 1121 ntBASIC6.07□□□□□ -1.44
APOEP02649 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
APOEP02649 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
APOEP02649 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.07□□□□□ -1.44
APOEP02649 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.07□□□□□ -1.44
APOEP02649 AC108751.3-201ENST00000461814 1020 ntBASIC6.07□□□□□ -1.44
APOEP02649 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
APOEP02649 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.07□□□□□ -1.44
APOEP02649 ST13P12-201ENST00000508958 1094 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms