Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.27□□□□□ -1.57
LMX1BO60663 AC017076.1-201ENST00000607613 578 ntBASIC5.27□□□□□ -1.57
LMX1BO60663 AC109309.2-201ENST00000612597 332 ntBASIC5.27□□□□□ -1.57
LMX1BO60663 AL080312.2-201ENST00000613001 630 ntBASIC5.27□□□□□ -1.57
LMX1BO60663 WBP1LP8-201ENST00000617401 327 ntBASIC5.27□□□□□ -1.57
LMX1BO60663 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.27□□□□□ -1.57
LMX1BO60663 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.27□□□□□ -1.57
LMX1BO60663 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.27□□□□□ -1.57
LMX1BO60663 AC063952.1-203ENST00000634410 658 ntBASIC5.27□□□□□ -1.57
LMX1BO60663 AC103703.1-201ENST00000634783 663 ntBASIC5.27□□□□□ -1.57
LMX1BO60663 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LMX1BO60663 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
LMX1BO60663 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
LMX1BO60663 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.27□□□□□ -1.57
LMX1BO60663 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LMX1BO60663 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
LMX1BO60663 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LMX1BO60663 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.26□□□□□ -1.57
LMX1BO60663 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.26□□□□□ -1.57
LMX1BO60663 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LMX1BO60663 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.26□□□□□ -1.57
LMX1BO60663 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.26□□□□□ -1.57
LMX1BO60663 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LMX1BO60663 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.26□□□□□ -1.57
LMX1BO60663 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.26□□□□□ -1.57
LMX1BO60663 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
LMX1BO60663 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.26□□□□□ -1.57
LMX1BO60663 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
LMX1BO60663 SUGT1P2-201ENST00000379452 992 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
LMX1BO60663 LYPLA1P3-201ENST00000402650 695 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.26□□□□□ -1.57
LMX1BO60663 AL357078.2-201ENST00000416486 427 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.26□□□□□ -1.57
LMX1BO60663 CHEK2P5-201ENST00000423877 246 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.26□□□□□ -1.57
LMX1BO60663 AL590399.2-201ENST00000427536 309 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
LMX1BO60663 RPL23AP19-201ENST00000436229 369 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 AL390879.1-201ENST00000439143 386 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.26□□□□□ -1.57
LMX1BO60663 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.26□□□□□ -1.57
LMX1BO60663 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.26□□□□□ -1.57
LMX1BO60663 ACA64.1-201ENST00000459171 127 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.26□□□□□ -1.57
LMX1BO60663 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.26□□□□□ -1.57
LMX1BO60663 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.26□□□□□ -1.57
LMX1BO60663 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.26□□□□□ -1.57
LMX1BO60663 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.26□□□□□ -1.57
LMX1BO60663 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.26□□□□□ -1.57
LMX1BO60663 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.26□□□□□ -1.57
LMX1BO60663 AC060775.1-201ENST00000518241 520 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 IGKV3D-25-201ENST00000519599 235 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.26□□□□□ -1.57
LMX1BO60663 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.26□□□□□ -1.57
LMX1BO60663 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.26□□□□□ -1.57
LMX1BO60663 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.26□□□□□ -1.57
LMX1BO60663 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LMX1BO60663 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.26□□□□□ -1.57
LMX1BO60663 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.26□□□□□ -1.57
LMX1BO60663 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.26□□□□□ -1.57
LMX1BO60663 AP005136.2-201ENST00000583253 1049 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.26□□□□□ -1.57
LMX1BO60663 AC119501.1-201ENST00000603646 475 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 AL713998.2-201ENST00000604538 1198 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 AC026979.4-201ENST00000606555 645 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 AL352984.2-202ENST00000613699 155 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 MIR6886-201ENST00000619864 61 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.26□□□□□ -1.57
LMX1BO60663 AC129915.3-201ENST00000634128 948 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.26□□□□□ -1.57
LMX1BO60663 MAPK10-350ENST00000641777 965 ntBASIC5.26□□□□□ -1.57
LMX1BO60663 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.26□□□□□ -1.57
LMX1BO60663 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
LMX1BO60663 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.26□□□□□ -1.57
LMX1BO60663 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
LMX1BO60663 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
LMX1BO60663 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
LMX1BO60663 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LMX1BO60663 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LMX1BO60663 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LMX1BO60663 AL121839.2-201ENST00000565058 6943 ntBASIC5.25□□□□□ -1.57
LMX1BO60663 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
LMX1BO60663 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.25□□□□□ -1.57
LMX1BO60663 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.25□□□□□ -1.57
LMX1BO60663 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
LMX1BO60663 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
LMX1BO60663 KYNUP3-201ENST00000574386 1341 ntBASIC5.25□□□□□ -1.57
LMX1BO60663 CASC19-238ENST00000641523 1558 ntBASIC5.25□□□□□ -1.57
LMX1BO60663 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
LMX1BO60663 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
LMX1BO60663 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.25□□□□□ -1.57
LMX1BO60663 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
LMX1BO60663 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
LMX1BO60663 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
LMX1BO60663 RNU6-891P-201ENST00000384280 111 ntBASIC5.25□□□□□ -1.57
LMX1BO60663 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms