Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SDCBPO00560 CFL1P4-201ENST00000451536 498 ntBASIC4.82□□□□□ -1.64
SDCBPO00560 AC104339.1-201ENST00000465478 348 ntBASIC4.82□□□□□ -1.64
SDCBPO00560 RPL9P15-201ENST00000491096 532 ntBASIC4.82□□□□□ -1.64
SDCBPO00560 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.82□□□□□ -1.64
SDCBPO00560 RN7SKP183-201ENST00000517169 324 ntBASIC4.82□□□□□ -1.64
SDCBPO00560 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.82□□□□□ -1.64
SDCBPO00560 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.82□□□□□ -1.64
SDCBPO00560 AC084121.1-201ENST00000533882 835 ntBASIC4.82□□□□□ -1.64
SDCBPO00560 LDHC-203ENST00000535809 757 ntTSL 5 BASIC4.82□□□□□ -1.64
SDCBPO00560 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC4.82□□□□□ -1.64
SDCBPO00560 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.82□□□□□ -1.64
SDCBPO00560 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.82□□□□□ -1.64
SDCBPO00560 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SDCBPO00560 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.82□□□□□ -1.64
SDCBPO00560 MIR4776-2-201ENST00000580204 80 ntBASIC4.82□□□□□ -1.64
SDCBPO00560 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC4.82□□□□□ -1.64
SDCBPO00560 AL022394.1-201ENST00000606979 292 ntBASIC4.82□□□□□ -1.64
SDCBPO00560 AL136131.3-201ENST00000607600 188 ntBASIC4.82□□□□□ -1.64
SDCBPO00560 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.82□□□□□ -1.64
SDCBPO00560 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SDCBPO00560 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.82□□□□□ -1.64
SDCBPO00560 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SDCBPO00560 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.82□□□□□ -1.64
SDCBPO00560 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.82□□□□□ -1.64
SDCBPO00560 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.82□□□□□ -1.64
SDCBPO00560 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.82□□□□□ -1.64
SDCBPO00560 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SDCBPO00560 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SDCBPO00560 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.82□□□□□ -1.64
SDCBPO00560 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SDCBPO00560 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.81□□□□□ -1.64
SDCBPO00560 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
SDCBPO00560 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SDCBPO00560 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.81□□□□□ -1.64
SDCBPO00560 AL031595.2-201ENST00000624215 19071 ntBASIC4.81□□□□□ -1.64
SDCBPO00560 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
SDCBPO00560 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.81□□□□□ -1.64
SDCBPO00560 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.81□□□□□ -1.64
SDCBPO00560 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SDCBPO00560 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SDCBPO00560 AC068870.1-201ENST00000563737 2455 ntBASIC4.81□□□□□ -1.64
SDCBPO00560 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.81□□□□□ -1.64
SDCBPO00560 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SDCBPO00560 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SDCBPO00560 COX6B1P3-201ENST00000312310 260 ntBASIC4.81□□□□□ -1.64
SDCBPO00560 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SDCBPO00560 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.81□□□□□ -1.64
SDCBPO00560 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SDCBPO00560 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SDCBPO00560 U3.23-201ENST00000391132 200 ntBASIC4.81□□□□□ -1.64
SDCBPO00560 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC4.81□□□□□ -1.64
SDCBPO00560 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.81□□□□□ -1.64
SDCBPO00560 GAPDHP75-201ENST00000433910 943 ntBASIC4.81□□□□□ -1.64
SDCBPO00560 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.81□□□□□ -1.64
SDCBPO00560 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.81□□□□□ -1.64
SDCBPO00560 PPIAP27-201ENST00000453800 265 ntBASIC4.81□□□□□ -1.64
SDCBPO00560 GEMIN2P1-201ENST00000454246 752 ntBASIC4.81□□□□□ -1.64
SDCBPO00560 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.81□□□□□ -1.64
SDCBPO00560 EIF4E2P2-201ENST00000492033 736 ntBASIC4.81□□□□□ -1.64
SDCBPO00560 DUTP1-201ENST00000493631 470 ntBASIC4.81□□□□□ -1.64
SDCBPO00560 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.81□□□□□ -1.64
SDCBPO00560 GAPDHP71-201ENST00000511530 1003 ntBASIC4.81□□□□□ -1.64
SDCBPO00560 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.81□□□□□ -1.64
SDCBPO00560 IGKV3D-25-201ENST00000519599 235 ntBASIC4.81□□□□□ -1.64
SDCBPO00560 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC4.81□□□□□ -1.64
SDCBPO00560 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.81□□□□□ -1.64
SDCBPO00560 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.81□□□□□ -1.64
SDCBPO00560 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.81□□□□□ -1.64
SDCBPO00560 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.81□□□□□ -1.64
SDCBPO00560 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SDCBPO00560 AC007956.1-201ENST00000555623 542 ntBASIC4.81□□□□□ -1.64
SDCBPO00560 AC093524.1-201ENST00000564266 1094 ntBASIC4.81□□□□□ -1.64
SDCBPO00560 AC009962.1-201ENST00000567327 3813 ntBASIC4.81□□□□□ -1.64
SDCBPO00560 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.81□□□□□ -1.64
SDCBPO00560 AC027216.1-201ENST00000577726 685 ntBASIC4.81□□□□□ -1.64
SDCBPO00560 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.81□□□□□ -1.64
SDCBPO00560 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.81□□□□□ -1.64
SDCBPO00560 AC008507.3-201ENST00000585753 472 ntBASIC4.81□□□□□ -1.64
SDCBPO00560 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.81□□□□□ -1.64
SDCBPO00560 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.81□□□□□ -1.64
SDCBPO00560 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.81□□□□□ -1.64
SDCBPO00560 NANOGP3-201ENST00000605855 286 ntBASIC4.81□□□□□ -1.64
SDCBPO00560 AP001437.1-201ENST00000608783 456 ntBASIC4.81□□□□□ -1.64
SDCBPO00560 AC097641.3-201ENST00000613523 464 ntBASIC4.81□□□□□ -1.64
SDCBPO00560 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SDCBPO00560 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
SDCBPO00560 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.81□□□□□ -1.64
SDCBPO00560 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SDCBPO00560 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC4.81□□□□□ -1.64
SDCBPO00560 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SDCBPO00560 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
SDCBPO00560 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SDCBPO00560 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.81□□□□□ -1.64
SDCBPO00560 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.81□□□□□ -1.64
SDCBPO00560 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
SDCBPO00560 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SDCBPO00560 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.81□□□□□ -1.64
SDCBPO00560 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.81□□□□□ -1.64
SDCBPO00560 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms