Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RBFOX3A6NFN3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
RBFOX3A6NFN3 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RBFOX3A6NFN3 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RBFOX3A6NFN3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
RBFOX3A6NFN3 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC4.52□□□□□ -1.69
RBFOX3A6NFN3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.52□□□□□ -1.69
RBFOX3A6NFN3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RBFOX3A6NFN3 AC093849.1-201ENST00000563631 2209 ntBASIC4.52□□□□□ -1.69
RBFOX3A6NFN3 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
RBFOX3A6NFN3 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AL731532.2-201ENST00000623542 1953 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AL034549.2-201ENST00000618285 3373 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 CDC27P2-201ENST00000425026 1922 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AL121886.1-201ENST00000358609 435 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AC019178.1-201ENST00000392337 440 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AC007068.1-201ENST00000396690 844 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AL096829.1-201ENST00000413677 457 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 PRUNEP1-201ENST00000425846 705 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 HSPE1P16-201ENST00000426640 348 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 EMC3-AS1-205ENST00000438698 534 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AL845321.1-201ENST00000444603 348 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 TPT1P1-201ENST00000458495 518 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 RPL12P31-201ENST00000478433 450 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AC016559.2-201ENST00000510759 359 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 KHDC1P1-201ENST00000511053 508 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AC137549.1-201ENST00000514243 533 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 RNA5SP418-201ENST00000515951 117 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 IGLVVII-41-1-201ENST00000518405 151 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AC005519.1-201ENST00000554490 601 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 RN7SL66P-201ENST00000582099 264 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 OFD1P15Y-201ENST00000411536 1392 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 MUC2-202ENST00000613187 4845 ntBASIC4.51□□□□□ -1.69
RBFOX3A6NFN3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.5□□□□□ -1.69
RBFOX3A6NFN3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.5□□□□□ -1.69
RBFOX3A6NFN3 AC022417.1-201ENST00000624768 1303 ntBASIC4.5□□□□□ -1.69
RBFOX3A6NFN3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RBFOX3A6NFN3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RBFOX3A6NFN3 AC000374.1-201ENST00000434698 1745 ntBASIC4.5□□□□□ -1.69
RBFOX3A6NFN3 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.5□□□□□ -1.69
RBFOX3A6NFN3 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RBFOX3A6NFN3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.5□□□□□ -1.69
RBFOX3A6NFN3 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.5□□□□□ -1.69
RBFOX3A6NFN3 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RBFOX3A6NFN3 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RBFOX3A6NFN3 AC007618.1-201ENST00000366455 732 ntBASIC4.5□□□□□ -1.69
RBFOX3A6NFN3 RPL21P67-201ENST00000402896 478 ntBASIC4.5□□□□□ -1.69
RBFOX3A6NFN3 RN7SKP221-201ENST00000410420 301 ntBASIC4.5□□□□□ -1.69
RBFOX3A6NFN3 COX5BP7-201ENST00000414780 274 ntBASIC4.5□□□□□ -1.69
RBFOX3A6NFN3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms