Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 HMGB3P7-201ENST00000400214 611 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 AL445213.1-201ENST00000412589 747 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 AC009237.1-201ENST00000442127 744 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 CXCR2P1-202ENST00000443392 1074 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 OR13K1P-201ENST00000444577 975 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 RN7SL170P-201ENST00000487098 295 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 RPL17P2-201ENST00000491913 451 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 AC025459.1-201ENST00000504072 156 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 AC091874.2-201ENST00000505889 720 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 SCARNA1-201ENST00000517138 166 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 OR8X1P-201ENST00000534542 869 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 AC068305.2-201ENST00000550567 1205 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 AC068620.3-201ENST00000602749 560 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 RPL12P48-201ENST00000605620 304 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 AC004836.1-201ENST00000623032 634 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 AP000550.3-201ENST00000637734 379 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 AC119674.1-212ENST00000641155 993 ntBASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL4A3BPQ9Y5P4 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 RNU6-1257P-201ENST00000384625 110 ntBASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 MIR621-201ENST00000384919 96 ntBASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AP003170.5-201ENST00000397185 335 ntBASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AL136131.1-201ENST00000406079 803 ntBASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AL034374.1-201ENST00000406329 351 ntBASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AC108479.1-201ENST00000431142 427 ntBASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AL645931.1-201ENST00000439737 410 ntBASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 HSPE1P22-201ENST00000456856 327 ntBASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 PSMC1P13-201ENST00000458195 985 ntBASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 TPT1P3-201ENST00000492841 512 ntBASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 ZNF519P4-201ENST00000514008 125 ntBASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 RNA5SP206-201ENST00000516703 121 ntBASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AC138701.1-201ENST00000524329 714 ntBASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 LINC00556-201ENST00000569603 412 ntBASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AC021851.1-201ENST00000608537 1082 ntBASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AL008723.3-201ENST00000608926 449 ntBASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AC024255.1-201ENST00000614376 102 ntBASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AC073593.1-201ENST00000624500 411 ntBASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AKAP17BP-201ENST00000431706 2719 ntBASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AC006511.3-201ENST00000624929 1783 ntBASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
COL4A3BPQ9Y5P4 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
COL4A3BPQ9Y5P4 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms