Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC090826.1-203ENST00000569235 490 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 MIR6809-201ENST00000612189 116 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 MIR6793-201ENST00000612376 63 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 MAPK10-328ENST00000641553 4009 ntBASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRAPPC4Q9Y296 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 SELENOWP1-201ENST00000322792 252 ntBASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 RPS4XP5-201ENST00000419038 768 ntBASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 AL603882.1-201ENST00000463059 681 ntBASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 OR7E157P-201ENST00000494376 911 ntBASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 SETP21-201ENST00000514799 892 ntBASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 CYCSP38-201ENST00000559840 322 ntBASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 AL163952.1-202ENST00000569625 600 ntBASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 AC108673.3-201ENST00000609183 335 ntBASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 uc_338.26-201ENST00000612659 160 ntBASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 OR8A1-204ENST00000642111 1145 ntBASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRAPPC4Q9Y296 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
TRAPPC4Q9Y296 AC003985.2-201ENST00000562268 1669 ntBASIC5.34□□□□□ -1.56
TRAPPC4Q9Y296 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 PSG10P-201ENST00000501199 1500 ntBASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 RNFT1P3-201ENST00000340898 1052 ntBASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 AL096711.1-201ENST00000404780 554 ntBASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 GPS2P1-201ENST00000411761 986 ntBASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 AC092106.1-201ENST00000444291 373 ntBASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 FRG2FP-204ENST00000453982 852 ntBASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 RN7SKP238-201ENST00000516483 249 ntBASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 WBP1LP3-201ENST00000523033 208 ntBASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 TOMM20P1-201ENST00000534518 427 ntBASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 AC092944.2-201ENST00000605443 889 ntBASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 AC008833.1-201ENST00000611633 691 ntBASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 AL139099.4-201ENST00000614802 114 ntBASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 AC024884.1-201ENST00000620583 399 ntBASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 AC129778.1-202ENST00000623812 261 ntBASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 SNX18P12-201ENST00000624821 759 ntBASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 AL591379.1-207ENST00000635982 261 ntBASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.33□□□□□ -1.56
TRAPPC4Q9Y296 AL078595.2-201ENST00000605309 1780 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms