Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.92□□□□□ -1.3
CLIP2Q9UDT6 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 RN7SKP17-201ENST00000411242 351 ntBASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 CHEK2P5-201ENST00000423877 246 ntBASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 AL731534.1-201ENST00000434711 269 ntBASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 RPS12P17-201ENST00000438591 377 ntBASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 AC064862.4-201ENST00000442180 334 ntBASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 AL162739.1-201ENST00000450606 307 ntBASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 AC093166.4-201ENST00000457867 318 ntBASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 RN7SL174P-201ENST00000475578 289 ntBASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 SNORA70.20-201ENST00000516848 126 ntBASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 AC112191.2-201ENST00000522428 333 ntBASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 GARSP1-201ENST00000570895 719 ntBASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 TXNP4-201ENST00000575018 310 ntBASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 AC011445.2-201ENST00000599274 173 ntBASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 RN7SL787P-201ENST00000613000 284 ntBASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 AC018628.1-201ENST00000624147 3819 ntBASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.91□□□□□ -1.3
CLIP2Q9UDT6 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 MIR375-201ENST00000362103 64 ntBASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 RNA5SP211-201ENST00000365516 117 ntBASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 RPS3AP38-201ENST00000435889 763 ntBASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 SUMO2P3-201ENST00000438311 288 ntBASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 CUBNP2-201ENST00000443534 1139 ntBASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 SNRPCP3-201ENST00000474888 476 ntBASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 AC099521.1-201ENST00000482557 334 ntBASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 HMGN2P36-201ENST00000529541 409 ntBASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 AC091078.2-201ENST00000557145 559 ntBASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 MIR4433B-201ENST00000581329 102 ntBASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 MIR193BHG-214ENST00000641765 509 ntBASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 MAPK10-350ENST00000641777 965 ntBASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CLIP2Q9UDT6 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.9□□□□□ -1.31
CLIP2Q9UDT6 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CLIP2Q9UDT6 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.31
CLIP2Q9UDT6 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CLIP2Q9UDT6 AC123769.1-201ENST00000530992 3192 ntBASIC6.9□□□□□ -1.31
CLIP2Q9UDT6 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 THAP12P9-201ENST00000503971 2360 ntBASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 RNA5SP178-201ENST00000410380 128 ntBASIC6.89□□□□□ -1.31
CLIP2Q9UDT6 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms