Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 USP9YP24-201ENST00000434374 697 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 ATP5LP2-201ENST00000440646 311 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 SNRPFP2-201ENST00000440710 251 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 CR769776.1-201ENST00000441254 787 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 USP9YP17-201ENST00000444617 696 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 AL590004.3-202ENST00000445883 451 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 AC069540.1-201ENST00000446320 988 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 AC026254.2-201ENST00000475295 371 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 AC095052.1-201ENST00000509955 863 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 NPM1P52-201ENST00000518264 846 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 KCTD9P6-201ENST00000522306 950 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 C1GALT1P1-201ENST00000548895 1089 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 AC068305.2-201ENST00000550567 1205 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 TPRX1P1-201ENST00000557620 319 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 AC013562.2-201ENST00000611632 603 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 AC004232.3-201ENST00000622977 525 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 AC011455.2-201ENST00000599320 3336 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 UGT2B27P-201ENST00000505092 1620 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 SAGE3P-201ENST00000619800 1635 ntBASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.16□□□□□ -1.26
PDLIM7Q9NR12 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AL136531.3-201ENST00000624378 3658 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 KIAA0100-203ENST00000544884 6856 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 RNA5SP242-201ENST00000364171 118 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 MIR513B-201ENST00000385136 84 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AC119751.3-201ENST00000399720 670 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 RN7SKP278-201ENST00000410504 342 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 HIGD1AP4-201ENST00000430194 280 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 NDUFA5P10-201ENST00000432147 357 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 PPIAP7-201ENST00000454070 489 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AC092155.2-201ENST00000454675 477 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AP002345.1-201ENST00000456493 928 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 TPT1P1-201ENST00000458495 518 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 RPS26P39-201ENST00000469206 341 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AC098847.1-201ENST00000473094 348 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AC124945.1-201ENST00000485133 188 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 OR5H7P-201ENST00000514084 930 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 PRMT5P1-201ENST00000514351 598 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 IGLV3-6-201ENST00000523937 250 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AC084337.1-201ENST00000524809 686 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AP000620.1-201ENST00000527147 504 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AC010547.7-201ENST00000570323 333 ntBASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC7.15□□□□□ -1.26
PDLIM7Q9NR12 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms