Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC9.87□□□□□ -0.83
RTN4Q9NQC3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
RTN4Q9NQC3 AC005730.3-201ENST00000583067 366 ntBASIC9.87□□□□□ -0.83
RTN4Q9NQC3 AC119868.2-201ENST00000583991 432 ntTSL 3 BASIC9.87□□□□□ -0.83
RTN4Q9NQC3 AL669942.1-201ENST00000611307 713 ntTSL 5 BASIC9.87□□□□□ -0.83
RTN4Q9NQC3 AC244255.1-201ENST00000613463 398 ntBASIC9.87□□□□□ -0.83
RTN4Q9NQC3 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
RTN4Q9NQC3 MIR6864-201ENST00000617935 70 ntBASIC9.87□□□□□ -0.83
RTN4Q9NQC3 AC087893.2-201ENST00000623272 255 ntBASIC9.87□□□□□ -0.83
RTN4Q9NQC3 FAAHP1-207ENST00000635606 398 ntTSL 3 BASIC9.87□□□□□ -0.83
RTN4Q9NQC3 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC9.87□□□□□ -0.83
RTN4Q9NQC3 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
RTN4Q9NQC3 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTN4Q9NQC3 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC9.87□□□□□ -0.83
RTN4Q9NQC3 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTN4Q9NQC3 AC006058.1-201ENST00000568686 5067 ntBASIC9.87□□□□□ -0.83
RTN4Q9NQC3 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTN4Q9NQC3 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
RTN4Q9NQC3 PPM1A-201ENST00000325642 1713 ntTSL 2 BASIC9.87□□□□□ -0.83
RTN4Q9NQC3 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC9.87□□□□□ -0.83
RTN4Q9NQC3 MOSPD1-203ENST00000370783 2364 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTN4Q9NQC3 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
RTN4Q9NQC3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC9.87□□□□□ -0.83
RTN4Q9NQC3 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RTN4Q9NQC3 ATF2-206ENST00000409635 2109 ntTSL 5 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 USP15-202ENST00000312635 2226 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 ANKRD45-201ENST00000333279 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 RNU6-694P-201ENST00000364071 147 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 Y_RNA.295-201ENST00000364918 102 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 RNU6-876P-201ENST00000391295 104 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AC016769.3-201ENST00000396562 315 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 RPS12P16-201ENST00000399739 407 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 SSXP10-201ENST00000402595 565 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 GULP1-205ENST00000409805 983 ntTSL 2 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 RNA5SP209-201ENST00000411237 97 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 RFC4-207ENST00000433496 1111 ntTSL 5 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 GAPDHP68-201ENST00000434621 1008 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 SNX18P9-201ENST00000440580 835 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AL606462.1-201ENST00000447187 451 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 PRPF38AP1-201ENST00000451976 933 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AL390728.3-201ENST00000452704 270 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 SBDSP1-204ENST00000453858 737 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AP1S2P1-201ENST00000457344 379 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AC023194.1-201ENST00000493084 308 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AC008525.1-201ENST00000508719 676 ntTSL 3 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 Y_RNA.693-201ENST00000516641 110 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AC090424.1-201ENST00000535243 736 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 LRRC37A13P-201ENST00000546055 287 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AC073176.1-201ENST00000560700 534 ntTSL 4 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AC099489.2-201ENST00000574976 260 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 LARP7P2-201ENST00000575306 125 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AP005119.2-201ENST00000579735 1105 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 FGF7P1-201ENST00000582820 288 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AC022966.2-201ENST00000587434 367 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AC020907.2-202ENST00000592174 728 ntTSL 3 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AC025278.2-201ENST00000598153 1063 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 Z98884.2-201ENST00000602406 393 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AC111186.1-201ENST00000604684 130 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 CCDC47-207ENST00000612558 1586 ntTSL 5 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AP003400.5-201ENST00000624827 617 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AL512662.1-201ENST00000624850 2251 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 PHKBP1-201ENST00000450951 1951 ntBASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 USP17L11-202ENST00000613973 1677 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 USP17L19-202ENST00000615989 1677 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 USP17L18-202ENST00000619296 1677 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC9.86□□□□□ -0.83
RTN4Q9NQC3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 MR1-209ENST00000617803 7584 ntTSL 5 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
RTN4Q9NQC3 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms