Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 RN7SKP81-201ENST00000365603 331 ntBASIC6.93□□□□□ -1.3
UPF2Q9HAU5 AC023141.3-201ENST00000436698 278 ntBASIC6.93□□□□□ -1.3
UPF2Q9HAU5 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 MAST4-IT1-201ENST00000514241 658 ntBASIC6.93□□□□□ -1.3
UPF2Q9HAU5 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.93□□□□□ -1.3
UPF2Q9HAU5 PMS2P3-207ENST00000529061 717 ntBASIC6.93□□□□□ -1.3
UPF2Q9HAU5 AC091078.2-201ENST00000557145 559 ntBASIC6.93□□□□□ -1.3
UPF2Q9HAU5 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 AGGF1P7-201ENST00000562369 913 ntBASIC6.93□□□□□ -1.3
UPF2Q9HAU5 AC090286.3-201ENST00000573133 187 ntBASIC6.93□□□□□ -1.3
UPF2Q9HAU5 AL583832.1-201ENST00000603227 784 ntBASIC6.93□□□□□ -1.3
UPF2Q9HAU5 AC139792.1-201ENST00000607051 647 ntBASIC6.93□□□□□ -1.3
UPF2Q9HAU5 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 AL157762.1-201ENST00000619612 415 ntBASIC6.93□□□□□ -1.3
UPF2Q9HAU5 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.93□□□□□ -1.3
UPF2Q9HAU5 MAPK10-328ENST00000641553 4009 ntBASIC6.92□□□□□ -1.3
UPF2Q9HAU5 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 RNA5SP326-201ENST00000363209 110 ntBASIC6.92□□□□□ -1.3
UPF2Q9HAU5 PEX12P1-201ENST00000400284 1048 ntBASIC6.92□□□□□ -1.3
UPF2Q9HAU5 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 AC092865.3-201ENST00000425390 1026 ntBASIC6.92□□□□□ -1.3
UPF2Q9HAU5 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 TUBB4BP6-201ENST00000437576 479 ntBASIC6.92□□□□□ -1.3
UPF2Q9HAU5 PPIAP32-201ENST00000449940 472 ntBASIC6.92□□□□□ -1.3
UPF2Q9HAU5 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 AC026782.2-201ENST00000510845 636 ntBASIC6.92□□□□□ -1.3
UPF2Q9HAU5 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 CASP1P2-201ENST00000526830 1258 ntBASIC6.92□□□□□ -1.3
UPF2Q9HAU5 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 MIR3157-201ENST00000578688 85 ntBASIC6.92□□□□□ -1.3
UPF2Q9HAU5 MIR4701-201ENST00000583094 63 ntBASIC6.92□□□□□ -1.3
UPF2Q9HAU5 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 AC002069.2-201ENST00000603580 883 ntBASIC6.92□□□□□ -1.3
UPF2Q9HAU5 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.92□□□□□ -1.3
UPF2Q9HAU5 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 AC008627.1-201ENST00000517511 1704 ntBASIC6.91□□□□□ -1.3
UPF2Q9HAU5 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 AL022324.2-201ENST00000434827 780 ntBASIC6.91□□□□□ -1.3
UPF2Q9HAU5 NDUFB4P8-201ENST00000435351 367 ntBASIC6.91□□□□□ -1.3
UPF2Q9HAU5 AL353662.1-201ENST00000439099 327 ntBASIC6.91□□□□□ -1.3
UPF2Q9HAU5 AC073465.2-201ENST00000440938 498 ntBASIC6.91□□□□□ -1.3
UPF2Q9HAU5 IGBP1P3-201ENST00000447449 1000 ntBASIC6.91□□□□□ -1.3
UPF2Q9HAU5 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 RPL12P24-201ENST00000474907 486 ntBASIC6.91□□□□□ -1.3
UPF2Q9HAU5 HMGN1P16-201ENST00000508308 283 ntBASIC6.91□□□□□ -1.3
UPF2Q9HAU5 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 RN7SL66P-201ENST00000582099 264 ntBASIC6.91□□□□□ -1.3
UPF2Q9HAU5 MIR4260-201ENST00000583107 67 ntBASIC6.91□□□□□ -1.3
UPF2Q9HAU5 AP001542.1-201ENST00000591314 200 ntBASIC6.91□□□□□ -1.3
UPF2Q9HAU5 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 AL136131.3-201ENST00000607600 188 ntBASIC6.91□□□□□ -1.3
UPF2Q9HAU5 AC090607.5-201ENST00000615692 224 ntBASIC6.91□□□□□ -1.3
UPF2Q9HAU5 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.91□□□□□ -1.3
UPF2Q9HAU5 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms