Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 AC027088.4-201ENST00000611559 1947 ntBASIC6.24□□□□□ -1.41
EBF3Q9H4W6 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
EBF3Q9H4W6 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 AC012254.3-201ENST00000591183 2117 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 GNG5P2-201ENST00000372054 207 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 Z68694.1-201ENST00000413929 841 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 RPL35AP3-201ENST00000414680 288 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 RPS15AP30-201ENST00000420976 390 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 MTCYBP32-201ENST00000427945 1084 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 HSFY7P-201ENST00000432672 318 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 RSL24D1P8-201ENST00000434442 492 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 LDHAP2-201ENST00000437325 985 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 HSFY8P-201ENST00000437934 318 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 VN1R96P-201ENST00000446052 858 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 YWHAEP1-201ENST00000453697 763 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 HSFY5P-201ENST00000453726 309 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 GEMIN2P1-201ENST00000454246 752 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 AC114728.1-201ENST00000488289 483 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 IGHVIII-67-4-201ENST00000524281 296 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 AC078878.1-201ENST00000539832 958 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 AL021918.2-201ENST00000613415 194 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 AL512624.1-201ENST00000613638 469 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 AC109809.1-201ENST00000619665 545 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 AC023510.2-201ENST00000622162 746 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 AL049767.1-202ENST00000637826 242 ntBASIC6.23□□□□□ -1.41
EBF3Q9H4W6 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.23□□□□□ -1.41
EBF3Q9H4W6 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 RNU105B-201ENST00000364478 208 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 RNU6-1176P-201ENST00000390955 107 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 RPS3AP2-201ENST00000407190 754 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 HMGA1P8-201ENST00000414130 321 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AL513325.1-201ENST00000417716 1034 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AC092651.1-201ENST00000426110 312 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 HAUS1P1-201ENST00000505275 832 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC6.22□□□□□ -1.41
EBF3Q9H4W6 AC112206.4-201ENST00000515142 405 ntBASIC6.22□□□□□ -1.41
EBF3Q9H4W6 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms