Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 RN7SKP186-201ENST00000365371 303 ntBASIC5.94□□□□□ -1.46
C9orf72Q96LT7 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 ADAM24P-201ENST00000398655 2101 ntBASIC5.94□□□□□ -1.46
C9orf72Q96LT7 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 RPS4XP5-201ENST00000419038 768 ntBASIC5.94□□□□□ -1.46
C9orf72Q96LT7 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.94□□□□□ -1.46
C9orf72Q96LT7 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 AL359839.1-201ENST00000451975 1160 ntBASIC5.94□□□□□ -1.46
C9orf72Q96LT7 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 OR7E157P-201ENST00000494376 911 ntBASIC5.94□□□□□ -1.46
C9orf72Q96LT7 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 IGKV2-4-201ENST00000523070 340 ntBASIC5.94□□□□□ -1.46
C9orf72Q96LT7 AC084824.2-201ENST00000548906 345 ntBASIC5.94□□□□□ -1.46
C9orf72Q96LT7 RPA2P1-201ENST00000556557 721 ntBASIC5.94□□□□□ -1.46
C9orf72Q96LT7 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 HIRAP1-201ENST00000605318 787 ntBASIC5.94□□□□□ -1.46
C9orf72Q96LT7 RNA5SP439-201ENST00000617595 124 ntBASIC5.94□□□□□ -1.46
C9orf72Q96LT7 AC245014.3-201ENST00000618589 347 ntBASIC5.94□□□□□ -1.46
C9orf72Q96LT7 FO681491.1-202ENST00000623392 737 ntBASIC5.94□□□□□ -1.46
C9orf72Q96LT7 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 AC073488.3-201ENST00000631611 778 ntBASIC5.94□□□□□ -1.46
C9orf72Q96LT7 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 GTF2IP4-201ENST00000453092 2054 ntBASIC5.94□□□□□ -1.46
C9orf72Q96LT7 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.94□□□□□ -1.46
C9orf72Q96LT7 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 AC023490.2-201ENST00000359859 470 ntBASIC5.93□□□□□ -1.46
C9orf72Q96LT7 RN7SKP185-201ENST00000362813 326 ntBASIC5.93□□□□□ -1.46
C9orf72Q96LT7 SUGT1P2-201ENST00000379452 992 ntBASIC5.93□□□□□ -1.46
C9orf72Q96LT7 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 RPS29P14-201ENST00000431518 171 ntBASIC5.93□□□□□ -1.46
C9orf72Q96LT7 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 CFL1P4-201ENST00000451536 498 ntBASIC5.93□□□□□ -1.46
C9orf72Q96LT7 AC084754.1-201ENST00000463466 464 ntBASIC5.93□□□□□ -1.46
C9orf72Q96LT7 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 AC060775.1-201ENST00000518241 520 ntBASIC5.93□□□□□ -1.46
C9orf72Q96LT7 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 AP000619.2-201ENST00000546014 969 ntBASIC5.93□□□□□ -1.46
C9orf72Q96LT7 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 HMGN2P47-201ENST00000559378 272 ntBASIC5.93□□□□□ -1.46
C9orf72Q96LT7 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 AL021918.2-201ENST00000613415 194 ntBASIC5.93□□□□□ -1.46
C9orf72Q96LT7 AC005618.4-201ENST00000625053 554 ntBASIC5.93□□□□□ -1.46
C9orf72Q96LT7 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 BCORP1-203ENST00000513194 5093 ntBASIC5.93□□□□□ -1.46
C9orf72Q96LT7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.93□□□□□ -1.46
C9orf72Q96LT7 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.92□□□□□ -1.46
C9orf72Q96LT7 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms