Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC068339.2-201ENST00000534395 618 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS50Q96JG6 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS50Q96JG6 AC133794.1-201ENST00000602731 914 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 AL133247.2-201ENST00000603236 482 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 WBP1LP12-201ENST00000604449 331 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 KATNBL1P5-201ENST00000605015 517 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 AL122023.1-201ENST00000622847 530 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 AC090772.4-201ENST00000623599 362 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 AC073592.6-201ENST00000624271 415 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 AC073593.1-201ENST00000624500 411 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS50Q96JG6 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS50Q96JG6 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
VPS50Q96JG6 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 AC105235.1-201ENST00000623208 1816 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 PROS2P-201ENST00000474651 1951 ntBASIC6.13□□□□□ -1.43
VPS50Q96JG6 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS50Q96JG6 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
VPS50Q96JG6 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
VPS50Q96JG6 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VPS50Q96JG6 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VPS50Q96JG6 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VPS50Q96JG6 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VPS50Q96JG6 OR7A2P-201ENST00000304105 930 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VPS50Q96JG6 RNU6-697P-201ENST00000363348 107 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 GNG5P2-201ENST00000372054 207 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
VPS50Q96JG6 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VPS50Q96JG6 CXADRP1-201ENST00000398098 1095 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 PEX12P1-201ENST00000400284 1048 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 RN7SKP161-201ENST00000411110 305 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VPS50Q96JG6 AL121882.1-201ENST00000422893 417 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 UBE2D3P3-201ENST00000426992 425 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 MGAT2P2-201ENST00000427194 797 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 AC002069.1-201ENST00000429649 1159 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 NEK2P2-201ENST00000438441 1338 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 EMC3-AS1-205ENST00000438698 534 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 RPSAP40-201ENST00000442343 891 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 AP002345.1-201ENST00000456493 928 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 AC010460.2-201ENST00000509054 677 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
VPS50Q96JG6 SNORA70.11-201ENST00000515987 138 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 SNORA70.13-201ENST00000516116 138 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 AC138701.1-201ENST00000524329 714 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 OR8X1P-201ENST00000534542 869 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 AC026956.1-201ENST00000558741 396 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 AC026826.3-201ENST00000561747 158 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 AC002519.2-203ENST00000567043 837 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 MTND1P8-201ENST00000571424 950 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 AC063977.7-201ENST00000594454 337 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 AC009501.3-201ENST00000605001 1352 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 AC097504.2-201ENST00000608088 454 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 uc_338.29-201ENST00000615099 168 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 CXADRP3-202ENST00000617265 1100 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 MRPL57P1-201ENST00000621486 265 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 AC097460.3-201ENST00000623099 442 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 AL132640.3-201ENST00000630473 177 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.12□□□□□ -1.43
VPS50Q96JG6 AC016745.2-201ENST00000608834 3443 ntBASIC6.12□□□□□ -1.43
VPS50Q96JG6 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms