Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC7.03□□□□□ -1.28
ERCC4Q92889 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC7.03□□□□□ -1.28
ERCC4Q92889 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.03□□□□□ -1.28
ERCC4Q92889 SEC11B-201ENST00000518383 499 ntBASIC7.03□□□□□ -1.28
ERCC4Q92889 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC7.03□□□□□ -1.28
ERCC4Q92889 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.03□□□□□ -1.28
ERCC4Q92889 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.03□□□□□ -1.28
ERCC4Q92889 AC087888.1-201ENST00000550884 1254 ntBASIC7.03□□□□□ -1.28
ERCC4Q92889 AC090888.2-201ENST00000559765 1144 ntBASIC7.03□□□□□ -1.28
ERCC4Q92889 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC7.03□□□□□ -1.28
ERCC4Q92889 NPIPB1P-202ENST00000588786 828 ntBASIC7.03□□□□□ -1.28
ERCC4Q92889 U1.25-201ENST00000614085 162 ntBASIC7.03□□□□□ -1.28
ERCC4Q92889 U1.34-201ENST00000618578 162 ntBASIC7.03□□□□□ -1.28
ERCC4Q92889 U1.31-201ENST00000620022 160 ntBASIC7.03□□□□□ -1.28
ERCC4Q92889 AL138693.1-201ENST00000622219 129 ntBASIC7.03□□□□□ -1.28
ERCC4Q92889 AC003992.1-201ENST00000635364 557 ntBASIC7.03□□□□□ -1.28
ERCC4Q92889 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC7.03□□□□□ -1.28
ERCC4Q92889 OR7A1P-202ENST00000641542 1158 ntBASIC7.03□□□□□ -1.28
ERCC4Q92889 AC074141.1-201ENST00000588129 2995 ntBASIC7.03□□□□□ -1.28
ERCC4Q92889 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
ERCC4Q92889 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.03□□□□□ -1.28
ERCC4Q92889 SELE-205ENST00000367777 3576 ntTSL 5 BASIC7.03□□□□□ -1.28
ERCC4Q92889 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.03□□□□□ -1.28
ERCC4Q92889 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
ERCC4Q92889 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
ERCC4Q92889 AC123769.1-201ENST00000530992 3192 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC4Q92889 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
ERCC4Q92889 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC4Q92889 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC4Q92889 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
ERCC4Q92889 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.02□□□□□ -1.29
ERCC4Q92889 AC010894.1-201ENST00000313760 361 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC4Q92889 AC019178.1-201ENST00000392337 440 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 AC003045.1-201ENST00000398779 713 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 RNA5SP155-201ENST00000411154 129 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 HMGA1P8-201ENST00000414130 321 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 AC096644.3-201ENST00000416788 338 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 AC015977.1-201ENST00000418887 292 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC7.02□□□□□ -1.29
ERCC4Q92889 AL589794.1-201ENST00000424971 390 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC7.02□□□□□ -1.29
ERCC4Q92889 AC021876.1-201ENST00000425959 359 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 NPM1P26-201ENST00000426339 738 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 AL354707.3-201ENST00000427308 331 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC7.02□□□□□ -1.29
ERCC4Q92889 MTND1P33-201ENST00000446251 917 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC4Q92889 COX4I1P2-201ENST00000447446 547 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC7.02□□□□□ -1.29
ERCC4Q92889 AC073476.1-201ENST00000452854 407 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.02□□□□□ -1.29
ERCC4Q92889 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC7.02□□□□□ -1.29
ERCC4Q92889 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC7.02□□□□□ -1.29
ERCC4Q92889 RN7SL714P-201ENST00000487050 298 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.02□□□□□ -1.29
ERCC4Q92889 RN7SL205P-201ENST00000490174 284 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC7.02□□□□□ -1.29
ERCC4Q92889 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.02□□□□□ -1.29
ERCC4Q92889 MINOS1P4-201ENST00000515470 318 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC7.02□□□□□ -1.29
ERCC4Q92889 IGKV2-19-201ENST00000518132 283 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.02□□□□□ -1.29
ERCC4Q92889 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC7.02□□□□□ -1.29
ERCC4Q92889 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.02□□□□□ -1.29
ERCC4Q92889 AC009729.1-201ENST00000548873 1133 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC7.02□□□□□ -1.29
ERCC4Q92889 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC7.02□□□□□ -1.29
ERCC4Q92889 AC090651.1-201ENST00000567865 634 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC7.02□□□□□ -1.29
ERCC4Q92889 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC4Q92889 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.02□□□□□ -1.29
ERCC4Q92889 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC7.02□□□□□ -1.29
ERCC4Q92889 AC012175.1-201ENST00000603755 531 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 AC069431.2-201ENST00000604149 1099 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.02□□□□□ -1.29
ERCC4Q92889 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC4Q92889 AC008759.3-201ENST00000613300 508 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC4Q92889 AC009464.1-201ENST00000615731 469 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 AC004801.6-201ENST00000616571 978 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 AL645927.2-201ENST00000618350 349 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC7.02□□□□□ -1.29
ERCC4Q92889 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC4Q92889 AC084824.4-201ENST00000620106 731 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 AC019226.2-201ENST00000625973 424 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 MTND2P41-201ENST00000637599 773 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC4Q92889 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.02□□□□□ -1.29
ERCC4Q92889 AC009501.3-201ENST00000605001 1352 ntBASIC7.02□□□□□ -1.29
ERCC4Q92889 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC4Q92889 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC7.02□□□□□ -1.29
ERCC4Q92889 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC4Q92889 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
ERCC4Q92889 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC7.02□□□□□ -1.29
ERCC4Q92889 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC7.02□□□□□ -1.29
ERCC4Q92889 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
ERCC4Q92889 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
ERCC4Q92889 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms