Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TM9SF4Q92544 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TM9SF4Q92544 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TM9SF4Q92544 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 AC120036.2-201ENST00000509729 1474 ntBASIC5.65□□□□□ -1.5
TM9SF4Q92544 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TM9SF4Q92544 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TM9SF4Q92544 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 RNA5SP273-201ENST00000362484 113 ntBASIC5.65□□□□□ -1.5
TM9SF4Q92544 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.65□□□□□ -1.5
TM9SF4Q92544 RNU11-6P-201ENST00000391127 133 ntBASIC5.65□□□□□ -1.5
TM9SF4Q92544 RN7SKP229-201ENST00000410465 302 ntBASIC5.65□□□□□ -1.5
TM9SF4Q92544 RN7SKP286-201ENST00000410894 299 ntBASIC5.65□□□□□ -1.5
TM9SF4Q92544 AC016769.2-201ENST00000414815 475 ntBASIC5.65□□□□□ -1.5
TM9SF4Q92544 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 RSL24D1P8-201ENST00000434442 492 ntBASIC5.65□□□□□ -1.5
TM9SF4Q92544 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 AL390879.1-201ENST00000439143 386 ntBASIC5.65□□□□□ -1.5
TM9SF4Q92544 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 FCF1P7-201ENST00000451185 558 ntBASIC5.65□□□□□ -1.5
TM9SF4Q92544 SNRPCP3-201ENST00000474888 476 ntBASIC5.65□□□□□ -1.5
TM9SF4Q92544 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 RNA5SP438-201ENST00000516561 112 ntBASIC5.65□□□□□ -1.5
TM9SF4Q92544 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 AP002981.1-201ENST00000517692 975 ntBASIC5.65□□□□□ -1.5
TM9SF4Q92544 TMEM97P2-201ENST00000517841 403 ntBASIC5.65□□□□□ -1.5
TM9SF4Q92544 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TM9SF4Q92544 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TM9SF4Q92544 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 AL162574.2-201ENST00000614618 657 ntBASIC5.65□□□□□ -1.5
TM9SF4Q92544 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.65□□□□□ -1.5
TM9SF4Q92544 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.65□□□□□ -1.5
TM9SF4Q92544 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
TM9SF4Q92544 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
TM9SF4Q92544 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TM9SF4Q92544 AL133243.2-201ENST00000610331 1621 ntBASIC5.65□□□□□ -1.51
TM9SF4Q92544 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TM9SF4Q92544 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TM9SF4Q92544 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
TM9SF4Q92544 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TM9SF4Q92544 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TM9SF4Q92544 AC011416.1-201ENST00000514947 1732 ntBASIC5.65□□□□□ -1.51
TM9SF4Q92544 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
TM9SF4Q92544 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
TM9SF4Q92544 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.65□□□□□ -1.51
TM9SF4Q92544 AL355834.1-201ENST00000556602 3965 ntBASIC5.65□□□□□ -1.51
TM9SF4Q92544 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TM9SF4Q92544 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TM9SF4Q92544 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 AC096921.2-201ENST00000561507 1916 ntBASIC5.64□□□□□ -1.51
TM9SF4Q92544 AL132656.3-201ENST00000606384 1595 ntBASIC5.64□□□□□ -1.51
TM9SF4Q92544 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TM9SF4Q92544 MIR143-201ENST00000385300 106 ntBASIC5.64□□□□□ -1.51
TM9SF4Q92544 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 RN7SKP151-201ENST00000410230 316 ntBASIC5.64□□□□□ -1.51
TM9SF4Q92544 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 USP9YP19-201ENST00000412165 485 ntBASIC5.64□□□□□ -1.51
TM9SF4Q92544 RANP7-201ENST00000418085 644 ntBASIC5.64□□□□□ -1.51
TM9SF4Q92544 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TM9SF4Q92544 AC016027.5-201ENST00000427227 210 ntBASIC5.64□□□□□ -1.51
TM9SF4Q92544 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 AC016908.1-201ENST00000442571 1219 ntBASIC5.64□□□□□ -1.51
TM9SF4Q92544 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 AP006222.1-205ENST00000450734 457 ntBASIC5.64□□□□□ -1.51
TM9SF4Q92544 AC083795.1-201ENST00000491760 320 ntBASIC5.64□□□□□ -1.51
TM9SF4Q92544 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.64□□□□□ -1.51
TM9SF4Q92544 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms