Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 SNORA70.20-201ENST00000516848 126 ntBASIC6.34□□□□□ -1.39
BEST2Q8NFU1 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
BEST2Q8NFU1 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
BEST2Q8NFU1 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.34□□□□□ -1.39
BEST2Q8NFU1 AL049779.3-201ENST00000557141 606 ntBASIC6.34□□□□□ -1.39
BEST2Q8NFU1 AC091078.2-201ENST00000557145 559 ntBASIC6.34□□□□□ -1.39
BEST2Q8NFU1 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.34□□□□□ -1.39
BEST2Q8NFU1 AC087468.1-201ENST00000604365 630 ntBASIC6.34□□□□□ -1.39
BEST2Q8NFU1 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.34□□□□□ -1.39
BEST2Q8NFU1 AL021368.1-201ENST00000607490 540 ntBASIC6.34□□□□□ -1.39
BEST2Q8NFU1 AC016911.1-201ENST00000613297 452 ntBASIC6.34□□□□□ -1.39
BEST2Q8NFU1 AC126175.1-201ENST00000617041 758 ntBASIC6.34□□□□□ -1.39
BEST2Q8NFU1 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.34□□□□□ -1.39
BEST2Q8NFU1 AL353684.1-201ENST00000622677 1120 ntBASIC6.34□□□□□ -1.39
BEST2Q8NFU1 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.34□□□□□ -1.39
BEST2Q8NFU1 TET1P1-201ENST00000426627 2301 ntBASIC6.34□□□□□ -1.39
BEST2Q8NFU1 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
BEST2Q8NFU1 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
BEST2Q8NFU1 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
BEST2Q8NFU1 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
BEST2Q8NFU1 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
BEST2Q8NFU1 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
BEST2Q8NFU1 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
BEST2Q8NFU1 AC130304.1-201ENST00000622942 2385 ntBASIC6.33□□□□□ -1.4
BEST2Q8NFU1 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 TMSB4XP4-201ENST00000323496 618 ntBASIC6.33□□□□□ -1.4
BEST2Q8NFU1 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 RN7SKP29-201ENST00000410957 272 ntBASIC6.33□□□□□ -1.4
BEST2Q8NFU1 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 AC093155.2-201ENST00000420734 937 ntBASIC6.33□□□□□ -1.4
BEST2Q8NFU1 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 RPS12P17-201ENST00000438591 377 ntBASIC6.33□□□□□ -1.4
BEST2Q8NFU1 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 AC093166.4-201ENST00000457867 318 ntBASIC6.33□□□□□ -1.4
BEST2Q8NFU1 RN7SL174P-201ENST00000475578 289 ntBASIC6.33□□□□□ -1.4
BEST2Q8NFU1 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 SETP3-201ENST00000581726 813 ntBASIC6.33□□□□□ -1.4
BEST2Q8NFU1 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 AC009237.12-201ENST00000604755 742 ntBASIC6.33□□□□□ -1.4
BEST2Q8NFU1 AC138473.1-201ENST00000605717 526 ntBASIC6.33□□□□□ -1.4
BEST2Q8NFU1 AC239803.2-201ENST00000610161 430 ntBASIC6.33□□□□□ -1.4
BEST2Q8NFU1 RNA5SP440-201ENST00000612665 119 ntBASIC6.33□□□□□ -1.4
BEST2Q8NFU1 OR11H2-202ENST00000641517 1085 ntBASIC6.33□□□□□ -1.4
BEST2Q8NFU1 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
BEST2Q8NFU1 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 MIR375-201ENST00000362103 64 ntBASIC6.32□□□□□ -1.4
BEST2Q8NFU1 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.32□□□□□ -1.4
BEST2Q8NFU1 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 RNA5SP178-201ENST00000410380 128 ntBASIC6.32□□□□□ -1.4
BEST2Q8NFU1 MRPL53P1-201ENST00000414323 319 ntBASIC6.32□□□□□ -1.4
BEST2Q8NFU1 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 TRGV7-201ENST00000427089 353 ntBASIC6.32□□□□□ -1.4
BEST2Q8NFU1 HMGN1P36-201ENST00000446623 298 ntBASIC6.32□□□□□ -1.4
BEST2Q8NFU1 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 RPL38P3-201ENST00000484463 213 ntBASIC6.32□□□□□ -1.4
BEST2Q8NFU1 NENFP3-201ENST00000503735 313 ntBASIC6.32□□□□□ -1.4
BEST2Q8NFU1 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 OR51A1P-201ENST00000511110 946 ntBASIC6.32□□□□□ -1.4
BEST2Q8NFU1 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 MIR2117-201ENST00000516780 80 ntBASIC6.32□□□□□ -1.4
BEST2Q8NFU1 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
BEST2Q8NFU1 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms