Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AC007365.2-201ENST00000428806 458 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 GTF2IP14-201ENST00000441415 586 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 AL357520.1-201ENST00000441557 453 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 MTCO1P19-201ENST00000443487 500 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 AL606662.1-201ENST00000445763 553 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 AC007327.1-201ENST00000447461 264 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 RPL30P6-201ENST00000475925 342 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 RN7SL379P-201ENST00000479912 293 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 RN7SL705P-201ENST00000481678 294 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 DCAF13P2-201ENST00000514188 555 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 RN7SKP242-201ENST00000515967 289 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 AP006587.5-201ENST00000532033 739 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 CCNG2P1-201ENST00000549521 1000 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 MIR3159-201ENST00000584572 74 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 AC011447.2-201ENST00000592921 283 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 AF131215.7-201ENST00000602443 707 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 AC021749.1-201ENST00000604322 607 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 AL035661.1-201ENST00000620459 1144 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 AC131009.3-201ENST00000621809 287 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 AL359757.1-201ENST00000623176 255 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 AL359195.2-201ENST00000623657 4412 ntBASIC6.46□□□□□ -1.38
NUP43Q8NFH3 MBD5-221ENST00000637159 902 ntTSL 5 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
NUP43Q8NFH3 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 CEP97-206ENST00000494050 2870 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 MAPK10-323ENST00000641493 3207 ntBASIC6.45□□□□□ -1.38
NUP43Q8NFH3 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.45□□□□□ -1.38
NUP43Q8NFH3 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 NACA3P-201ENST00000359690 648 ntBASIC6.45□□□□□ -1.38
NUP43Q8NFH3 Y_RNA.6-201ENST00000362350 114 ntBASIC6.45□□□□□ -1.38
NUP43Q8NFH3 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 AC008171.1-201ENST00000395058 200 ntBASIC6.45□□□□□ -1.38
NUP43Q8NFH3 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 AL359633.1-201ENST00000421403 310 ntBASIC6.45□□□□□ -1.38
NUP43Q8NFH3 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 MYL6P3-201ENST00000436904 432 ntBASIC6.45□□□□□ -1.38
NUP43Q8NFH3 AL354941.1-201ENST00000438600 464 ntBASIC6.45□□□□□ -1.38
NUP43Q8NFH3 BX005266.3-201ENST00000443013 1075 ntBASIC6.45□□□□□ -1.38
NUP43Q8NFH3 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 SRP68P2-201ENST00000456184 254 ntBASIC6.45□□□□□ -1.38
NUP43Q8NFH3 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 AC107015.1-201ENST00000466902 747 ntBASIC6.45□□□□□ -1.38
NUP43Q8NFH3 NDUFA5P5-201ENST00000468361 342 ntBASIC6.45□□□□□ -1.38
NUP43Q8NFH3 AC069304.1-201ENST00000491593 704 ntBASIC6.45□□□□□ -1.38
NUP43Q8NFH3 AC021220.1-201ENST00000507445 630 ntBASIC6.45□□□□□ -1.38
NUP43Q8NFH3 AC011352.2-201ENST00000514574 1016 ntBASIC6.45□□□□□ -1.38
NUP43Q8NFH3 MTCYBP19-201ENST00000517463 1124 ntBASIC6.45□□□□□ -1.38
NUP43Q8NFH3 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC6.45□□□□□ -1.38
NUP43Q8NFH3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms