Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 AC245884.10-201ENST00000597355 337 ntBASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 AC068870.2-201ENST00000620635 389 ntBASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 DMD-202ENST00000343523 5623 ntTSL 5 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.43□□□□□ -1.22
SMC1BQ8NDV3 AC010168.2-201ENST00000562691 5428 ntBASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 DPY19L1P1-201ENST00000417811 2594 ntBASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 SNORD51.1-201ENST00000365405 77 ntBASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 AL139128.1-201ENST00000413921 941 ntBASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 VN1R37P-201ENST00000419096 748 ntBASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 EEF1B2P5-201ENST00000444820 548 ntBASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 UBA52P7-201ENST00000486088 380 ntBASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 PCNAP1-201ENST00000505363 709 ntBASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 AC010468.3-201ENST00000508225 458 ntBASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 RNU6-491P-201ENST00000516099 110 ntBASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 AC027667.1-201ENST00000545814 304 ntBASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 RPL12P48-201ENST00000605620 304 ntBASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 AL450270.1-201ENST00000606160 391 ntBASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 AL136131.3-201ENST00000607600 188 ntBASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 AL355802.4-201ENST00000607635 548 ntBASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 AL049539.1-201ENST00000611964 459 ntBASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 AC008115.4-201ENST00000619780 775 ntBASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 AL592429.1-201ENST00000403909 1473 ntBASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
SMC1BQ8NDV3 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 MAPK10-365ENST00000641902 3825 ntBASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 RAB28P1-201ENST00000411517 641 ntBASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 AL590762.4-201ENST00000425885 253 ntBASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 AC108729.1-201ENST00000487812 947 ntBASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 HIGD1AP14-201ENST00000507617 282 ntBASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 AC147055.3-201ENST00000510547 851 ntBASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 AL671862.1-201ENST00000515851 349 ntBASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 CR383656.6-201ENST00000550518 394 ntBASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 AC015923.1-202ENST00000581421 491 ntTSL 2 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 AC133794.1-201ENST00000602731 914 ntBASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 BUB1P1-201ENST00000603541 607 ntBASIC7.41□□□□□ -1.22
SMC1BQ8NDV3 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms