Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 HMGB3P24-201ENST00000433260 622 ntBASIC4.84□□□□□ -1.64
CCDC168Q8NDH2 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC4.84□□□□□ -1.64
CCDC168Q8NDH2 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.84□□□□□ -1.64
CCDC168Q8NDH2 AC104164.1-201ENST00000460282 590 ntBASIC4.84□□□□□ -1.64
CCDC168Q8NDH2 AC090638.1-201ENST00000498296 909 ntBASIC4.84□□□□□ -1.64
CCDC168Q8NDH2 AC008629.2-201ENST00000503783 483 ntBASIC4.84□□□□□ -1.64
CCDC168Q8NDH2 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.84□□□□□ -1.64
CCDC168Q8NDH2 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.84□□□□□ -1.64
CCDC168Q8NDH2 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.84□□□□□ -1.64
CCDC168Q8NDH2 C1GALT1P3-201ENST00000522049 819 ntBASIC4.84□□□□□ -1.64
CCDC168Q8NDH2 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.84□□□□□ -1.64
CCDC168Q8NDH2 AL133406.3-201ENST00000606817 541 ntBASIC4.84□□□□□ -1.64
CCDC168Q8NDH2 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.84□□□□□ -1.64
CCDC168Q8NDH2 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC168Q8NDH2 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
CCDC168Q8NDH2 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC168Q8NDH2 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC168Q8NDH2 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC168Q8NDH2 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AC026951.1-201ENST00000559530 2459 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AC126755.2-208ENST00000327792 462 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AC138969.1-213ENST00000331436 462 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 RNA5SP319-201ENST00000362768 119 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 RNA5SP505-201ENST00000364748 108 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AL035419.1-201ENST00000397037 564 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 CHMP1B2P-201ENST00000399581 597 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 PRELID1P2-201ENST00000407805 396 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AL590240.2-201ENST00000413370 894 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 P2RY10P2-201ENST00000416730 913 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 NENFP1-201ENST00000419476 466 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 RPS15AP30-201ENST00000420976 390 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 OR2AM1P-201ENST00000422137 422 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AL133173.1-201ENST00000423458 397 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AC091180.1-201ENST00000462104 372 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AL049872.1-201ENST00000556323 322 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AC012414.7-202ENST00000622705 1090 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AL359091.1-201ENST00000449048 1734 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 COX6CP17-201ENST00000421389 185 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AC012519.1-201ENST00000424588 610 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 RPL18P10-201ENST00000425606 538 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 OR6D1P-201ENST00000436165 939 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 HPRT1P1-201ENST00000509498 657 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 RNU6-941P-201ENST00000516346 108 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AC005084.1-201ENST00000605160 304 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AL109618.2-201ENST00000605527 211 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 AC093799.2-201ENST00000610062 578 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 CYP4F35P-202ENST00000636121 390 ntBASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC168Q8NDH2 HSPA8P18-201ENST00000439846 1928 ntBASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 RNA5SP305-201ENST00000362665 119 ntBASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 RNU1-77P-201ENST00000390868 162 ntBASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 RPS3AP53-201ENST00000454716 778 ntBASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 RPL5P22-201ENST00000480199 884 ntBASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC168Q8NDH2 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms