Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 NDUFA5P1-201ENST00000433858 341 ntBASIC6.58□□□□□ -1.36
HERC6Q8IVU3 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.58□□□□□ -1.36
HERC6Q8IVU3 AC092824.1-201ENST00000483524 576 ntBASIC6.58□□□□□ -1.36
HERC6Q8IVU3 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 COL6A4P2-205ENST00000509855 506 ntBASIC6.58□□□□□ -1.36
HERC6Q8IVU3 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 AC044860.2-201ENST00000561005 179 ntBASIC6.58□□□□□ -1.36
HERC6Q8IVU3 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 FAM27E4-201ENST00000605259 342 ntBASIC6.58□□□□□ -1.36
HERC6Q8IVU3 AC008833.1-201ENST00000611633 691 ntBASIC6.58□□□□□ -1.36
HERC6Q8IVU3 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 AC063952.1-203ENST00000634410 658 ntBASIC6.58□□□□□ -1.36
HERC6Q8IVU3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 NAMPTP1-201ENST00000440465 2514 ntBASIC6.58□□□□□ -1.36
HERC6Q8IVU3 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 AL161901.1-201ENST00000624954 3425 ntBASIC6.58□□□□□ -1.36
HERC6Q8IVU3 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.58□□□□□ -1.36
HERC6Q8IVU3 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 AC105235.1-201ENST00000623208 1816 ntBASIC6.57□□□□□ -1.36
HERC6Q8IVU3 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 CCNT2P1-201ENST00000423082 1315 ntBASIC6.57□□□□□ -1.36
HERC6Q8IVU3 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 RNU6-618P-201ENST00000363518 112 ntBASIC6.57□□□□□ -1.36
HERC6Q8IVU3 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 AL512504.1-201ENST00000415494 778 ntBASIC6.57□□□□□ -1.36
HERC6Q8IVU3 AC017078.1-201ENST00000416146 368 ntBASIC6.57□□□□□ -1.36
HERC6Q8IVU3 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 NPM1P22-201ENST00000427761 952 ntBASIC6.57□□□□□ -1.36
HERC6Q8IVU3 AL590623.1-201ENST00000427864 105 ntBASIC6.57□□□□□ -1.36
HERC6Q8IVU3 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 SIAH1P1-201ENST00000479411 923 ntBASIC6.57□□□□□ -1.36
HERC6Q8IVU3 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.57□□□□□ -1.36
HERC6Q8IVU3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 AC006530.1-201ENST00000555980 571 ntBASIC6.57□□□□□ -1.36
HERC6Q8IVU3 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 AC096861.1-201ENST00000616652 240 ntBASIC6.57□□□□□ -1.36
HERC6Q8IVU3 AC006213.5-201ENST00000619673 288 ntBASIC6.57□□□□□ -1.36
HERC6Q8IVU3 HPVC1-201ENST00000629899 1198 ntBASIC6.57□□□□□ -1.36
HERC6Q8IVU3 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 PARP4P1-201ENST00000435945 2337 ntBASIC6.57□□□□□ -1.36
HERC6Q8IVU3 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 AC119674.1-202ENST00000641333 1860 ntBASIC6.57□□□□□ -1.36
HERC6Q8IVU3 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 DOCK11P1-201ENST00000553480 5932 ntBASIC6.57□□□□□ -1.36
HERC6Q8IVU3 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 GUCY1B2-204ENST00000531898 1979 ntBASIC6.57□□□□□ -1.36
HERC6Q8IVU3 AC073365.1-203ENST00000641055 1992 ntBASIC6.57□□□□□ -1.36
HERC6Q8IVU3 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
HERC6Q8IVU3 MAPK10-261ENST00000641050 3109 ntBASIC6.56□□□□□ -1.36
HERC6Q8IVU3 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.56□□□□□ -1.36
HERC6Q8IVU3 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
HERC6Q8IVU3 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms