Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NUP54Q7Z3B4 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
NUP54Q7Z3B4 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NUP54Q7Z3B4 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
NUP54Q7Z3B4 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.66□□□□□ -1.5
NUP54Q7Z3B4 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.66□□□□□ -1.5
NUP54Q7Z3B4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.66□□□□□ -1.5
NUP54Q7Z3B4 AL355377.1-201ENST00000621125 1653 ntBASIC5.66□□□□□ -1.5
NUP54Q7Z3B4 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 AC104966.1-201ENST00000467010 1464 ntBASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 RNU1-134P-201ENST00000362935 165 ntBASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 AL451142.1-201ENST00000375867 775 ntBASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 VN1R12P-201ENST00000403778 876 ntBASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 ARAFP1-201ENST00000422172 605 ntBASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 SEPT14P12-201ENST00000442280 560 ntBASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 RPL6P30-201ENST00000443382 862 ntBASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 AC097463.1-201ENST00000447288 481 ntBASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 RPL23AP60-201ENST00000450011 454 ntBASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 AC073594.1-201ENST00000462065 364 ntBASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 RN7SKP67-201ENST00000515905 235 ntBASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 AC021269.1-201ENST00000526860 705 ntBASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 AC006512.2-201ENST00000543250 486 ntBASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 AC004241.3-201ENST00000611728 517 ntBASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 RFPL4AP6-201ENST00000616792 846 ntBASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 AL031658.2-201ENST00000616850 651 ntBASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.65□□□□□ -1.5
NUP54Q7Z3B4 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
NUP54Q7Z3B4 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NUP54Q7Z3B4 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.65□□□□□ -1.51
NUP54Q7Z3B4 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NUP54Q7Z3B4 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NUP54Q7Z3B4 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NUP54Q7Z3B4 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.65□□□□□ -1.51
NUP54Q7Z3B4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NUP54Q7Z3B4 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
NUP54Q7Z3B4 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
NUP54Q7Z3B4 AC022325.1-201ENST00000502748 2199 ntBASIC5.65□□□□□ -1.51
NUP54Q7Z3B4 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AC018717.1-201ENST00000457712 1505 ntBASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AC107977.1-201ENST00000355745 939 ntBASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 U3.23-201ENST00000391132 200 ntBASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AC015977.1-201ENST00000418887 292 ntBASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 RPL12P12-201ENST00000424633 501 ntBASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 TRIM60P16-201ENST00000444048 694 ntBASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 RAB28P2-201ENST00000454299 641 ntBASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AL356390.1-201ENST00000455684 397 ntBASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 CR383658.1-201ENST00000514609 734 ntBASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.64□□□□□ -1.51
NUP54Q7Z3B4 OR4A6P-201ENST00000534364 970 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms