Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHFQ7M4L6 OR6R1P-201ENST00000431838 940 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 HMGN1P32-201ENST00000441744 256 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 OR2L9P-201ENST00000444456 913 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 WDR82P2-201ENST00000444540 928 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 AC093719.1-201ENST00000480427 441 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 RN7SL502P-201ENST00000481857 290 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 RPL23AP40-201ENST00000487630 390 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 AK4P6-201ENST00000505168 528 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHFQ7M4L6 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHFQ7M4L6 AC010374.2-201ENST00000512933 535 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 RNA5SP206-201ENST00000516703 121 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 AC124891.1-201ENST00000536322 519 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 AL049779.3-201ENST00000557141 606 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 AC015911.5-201ENST00000587076 451 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 AL163051.2-201ENST00000618976 735 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 AC125336.1-201ENST00000508893 2827 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SHFQ7M4L6 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 AC004076.2-201ENST00000620532 3323 ntBASIC5.44□□□□□ -1.54
SHFQ7M4L6 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SHFQ7M4L6 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
SHFQ7M4L6 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHFQ7M4L6 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHFQ7M4L6 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHFQ7M4L6 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHFQ7M4L6 AC016583.1-201ENST00000624221 2431 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHFQ7M4L6 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHFQ7M4L6 RNA5SP85-201ENST00000365378 119 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHFQ7M4L6 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SHFQ7M4L6 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 RNA5SP231-201ENST00000410496 138 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 AC112492.2-201ENST00000432774 1030 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 AC013403.1-201ENST00000436954 263 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SHFQ7M4L6 AL133351.3-201ENST00000454998 193 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 OSTCP1-201ENST00000455507 450 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 LDHBP2-201ENST00000456969 1005 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 ACA64.4-201ENST00000459070 127 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 AC108729.2-201ENST00000476543 840 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 FABP5P6-201ENST00000510588 409 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 RNU6-1102P-201ENST00000516149 96 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 RN7SKP288-201ENST00000516227 268 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 AC131935.1-201ENST00000524621 333 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 AC135983.3-201ENST00000528049 1226 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 AC025283.1-201ENST00000572039 734 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 ABI1P1-201ENST00000603375 1120 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 AC008555.7-201ENST00000605008 583 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 AC135178.6-201ENST00000605314 398 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 AC141002.1-201ENST00000607025 279 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 AL391834.2-201ENST00000609982 546 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 AL356608.1-201ENST00000610034 820 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 AC010872.1-201ENST00000624225 675 ntBASIC5.43□□□□□ -1.54
SHFQ7M4L6 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
SHFQ7M4L6 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms