Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VPS13CQ709C8 HSPD1P7-201ENST00000447985 1686 ntBASIC4.45□□□□□ -1.7
VPS13CQ709C8 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 RNU6-398P-201ENST00000384143 109 ntBASIC4.44□□□□□ -1.7
VPS13CQ709C8 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 AL161747.1-201ENST00000480068 358 ntBASIC4.44□□□□□ -1.7
VPS13CQ709C8 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 RN7SKP99-201ENST00000517028 307 ntBASIC4.44□□□□□ -1.7
VPS13CQ709C8 AP002981.1-201ENST00000517692 975 ntBASIC4.44□□□□□ -1.7
VPS13CQ709C8 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 AL049779.3-201ENST00000557141 606 ntBASIC4.44□□□□□ -1.7
VPS13CQ709C8 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 MEGF10-201ENST00000274473 7594 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 KIRREL1-203ENST00000368172 6870 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 EIF3KP3-201ENST00000514461 639 ntBASIC4.44□□□□□ -1.7
VPS13CQ709C8 RNA5SP392-201ENST00000516905 112 ntBASIC4.44□□□□□ -1.7
VPS13CQ709C8 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.44□□□□□ -1.7
VPS13CQ709C8 YWHABP2-201ENST00000540201 713 ntBASIC4.44□□□□□ -1.7
VPS13CQ709C8 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 ZNF592-201ENST00000299927 7863 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 WWC2-205ENST00000504005 5247 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 SIPA1L2-201ENST00000262861 6555 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 AC139713.2-214ENST00000642059 1811 ntBASIC4.44□□□□□ -1.7
VPS13CQ709C8 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 AL009179.1-201ENST00000406085 265 ntBASIC4.44□□□□□ -1.7
VPS13CQ709C8 DDX39BP1-205ENST00000422507 192 ntBASIC4.44□□□□□ -1.7
VPS13CQ709C8 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 BZW1P1-201ENST00000454901 1240 ntBASIC4.44□□□□□ -1.7
VPS13CQ709C8 RN7SL481P-201ENST00000477764 299 ntBASIC4.44□□□□□ -1.7
VPS13CQ709C8 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 HPRT1P1-201ENST00000509498 657 ntBASIC4.44□□□□□ -1.7
VPS13CQ709C8 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 AC092490.3-201ENST00000545370 572 ntBASIC4.44□□□□□ -1.7
VPS13CQ709C8 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 BNIP3P22-201ENST00000593399 556 ntBASIC4.44□□□□□ -1.7
VPS13CQ709C8 AC027334.1-201ENST00000603257 310 ntBASIC4.44□□□□□ -1.7
VPS13CQ709C8 AL391358.1-201ENST00000605342 190 ntBASIC4.44□□□□□ -1.7
VPS13CQ709C8 MTCO1P1-201ENST00000624263 1081 ntBASIC4.44□□□□□ -1.7
VPS13CQ709C8 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 TXNL1-201ENST00000217515 6894 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 OPCML-201ENST00000331898 6833 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 DCAF4L1-201ENST00000333141 4772 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VPS13CQ709C8 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
VPS13CQ709C8 U3.22-201ENST00000391120 215 ntBASIC4.43□□□□□ -1.7
VPS13CQ709C8 RSU1P1-201ENST00000453416 441 ntBASIC4.43□□□□□ -1.7
VPS13CQ709C8 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS13CQ709C8 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 ANO3-201ENST00000256737 6642 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS13CQ709C8 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS13CQ709C8 AC016745.2-201ENST00000608834 3443 ntBASIC4.43□□□□□ -1.7
VPS13CQ709C8 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS13CQ709C8 AP005432.1-201ENST00000580891 3485 ntBASIC4.43□□□□□ -1.7
VPS13CQ709C8 GON4L-202ENST00000361040 5118 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS13CQ709C8 MIR23B-201ENST00000384832 97 ntBASIC4.43□□□□□ -1.7
VPS13CQ709C8 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.43□□□□□ -1.7
VPS13CQ709C8 RSL24D1P6-201ENST00000426934 401 ntBASIC4.43□□□□□ -1.7
VPS13CQ709C8 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms