Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 MIR1910-201ENST00000636955 80 ntBASIC5.93□□□□□ -1.46
NKX6-1P78426 AC183089.2-201ENST00000637931 916 ntBASIC5.93□□□□□ -1.46
NKX6-1P78426 AC139713.2-210ENST00000641741 992 ntBASIC5.93□□□□□ -1.46
NKX6-1P78426 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX6-1P78426 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.93□□□□□ -1.46
NKX6-1P78426 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX6-1P78426 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NKX6-1P78426 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX6-1P78426 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NKX6-1P78426 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
NKX6-1P78426 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX6-1P78426 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NKX6-1P78426 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
NKX6-1P78426 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
NKX6-1P78426 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
NKX6-1P78426 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NKX6-1P78426 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX6-1P78426 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX6-1P78426 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.92□□□□□ -1.46
NKX6-1P78426 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NKX6-1P78426 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX6-1P78426 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NKX6-1P78426 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
NKX6-1P78426 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
NKX6-1P78426 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.92□□□□□ -1.46
NKX6-1P78426 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX6-1P78426 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
NKX6-1P78426 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX6-1P78426 MIR199B-201ENST00000384849 110 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
NKX6-1P78426 RNU6-932P-201ENST00000391108 106 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 RPL9P21-201ENST00000392269 505 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 AC105402.1-201ENST00000413336 545 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX6-1P78426 MTCO3P4-201ENST00000419236 787 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.92□□□□□ -1.46
NKX6-1P78426 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX6-1P78426 AC099063.2-201ENST00000446360 662 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 SEPT14P24-201ENST00000447236 180 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.92□□□□□ -1.46
NKX6-1P78426 TRY2P-201ENST00000448860 689 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NKX6-1P78426 AC021146.11-201ENST00000503319 491 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 AC131392.1-201ENST00000506490 633 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
NKX6-1P78426 AC138866.2-201ENST00000508650 584 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX6-1P78426 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.92□□□□□ -1.46
NKX6-1P78426 AL356801.1-201ENST00000559320 294 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.92□□□□□ -1.46
NKX6-1P78426 RBM22P12-201ENST00000567098 1255 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.92□□□□□ -1.46
NKX6-1P78426 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.92□□□□□ -1.46
NKX6-1P78426 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX6-1P78426 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX6-1P78426 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX6-1P78426 AC079315.1-201ENST00000602952 623 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 AC113368.1-201ENST00000603736 382 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 AC011891.2-201ENST00000604949 397 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 AL035410.2-201ENST00000604963 864 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 AC011374.2-201ENST00000607135 526 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX6-1P78426 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX6-1P78426 AC012676.3-201ENST00000614983 479 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.92□□□□□ -1.46
NKX6-1P78426 Z99129.2-201ENST00000619967 314 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 AC012653.2-201ENST00000621880 420 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 AC104985.3-201ENST00000623479 597 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 AP001052.1-201ENST00000626421 99 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 AC119674.1-212ENST00000641155 993 ntBASIC5.92□□□□□ -1.46
NKX6-1P78426 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX6-1P78426 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NKX6-1P78426 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX6-1P78426 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.92□□□□□ -1.46
NKX6-1P78426 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX6-1P78426 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.92□□□□□ -1.46
NKX6-1P78426 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
NKX6-1P78426 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX6-1P78426 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NKX6-1P78426 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX6-1P78426 AC007993.1-201ENST00000621298 2430 ntBASIC5.91□□□□□ -1.46
NKX6-1P78426 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NKX6-1P78426 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC5.91□□□□□ -1.46
NKX6-1P78426 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NKX6-1P78426 AL596244.1-201ENST00000567068 3779 ntBASIC5.91□□□□□ -1.46
NKX6-1P78426 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NKX6-1P78426 ZNF402P-201ENST00000404435 3100 ntBASIC5.91□□□□□ -1.46
NKX6-1P78426 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
NKX6-1P78426 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NKX6-1P78426 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
NKX6-1P78426 RNU6-666P-201ENST00000363499 107 ntBASIC5.91□□□□□ -1.46
NKX6-1P78426 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NKX6-1P78426 AL391419.1-201ENST00000398901 1275 ntBASIC5.91□□□□□ -1.46
NKX6-1P78426 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.91□□□□□ -1.46
NKX6-1P78426 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NKX6-1P78426 AP000357.1-201ENST00000409926 1165 ntBASIC5.91□□□□□ -1.46
NKX6-1P78426 RNA5SP498-201ENST00000411342 120 ntBASIC5.91□□□□□ -1.46
NKX6-1P78426 DHFRP2-201ENST00000414224 547 ntBASIC5.91□□□□□ -1.46
NKX6-1P78426 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms