Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
TPM4P67936 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TPM4P67936 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TPM4P67936 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.37□□□□□ -1.39
TPM4P67936 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TPM4P67936 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TPM4P67936 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TPM4P67936 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TPM4P67936 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TPM4P67936 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
TPM4P67936 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
TPM4P67936 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TPM4P67936 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TPM4P67936 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.36□□□□□ -1.39
TPM4P67936 AC120036.2-201ENST00000509729 1474 ntBASIC6.36□□□□□ -1.39
TPM4P67936 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TPM4P67936 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TPM4P67936 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TPM4P67936 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TPM4P67936 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TPM4P67936 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TPM4P67936 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
TPM4P67936 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TPM4P67936 RN7SKP77-201ENST00000363261 353 ntBASIC6.36□□□□□ -1.39
TPM4P67936 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
TPM4P67936 AC096921.1-201ENST00000411661 375 ntBASIC6.36□□□□□ -1.39
TPM4P67936 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.36□□□□□ -1.39
TPM4P67936 DPPA2P2-201ENST00000418220 897 ntBASIC6.36□□□□□ -1.39
TPM4P67936 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.36□□□□□ -1.39
TPM4P67936 AC108479.1-201ENST00000431142 427 ntBASIC6.36□□□□□ -1.39
TPM4P67936 RPL12P18-201ENST00000437175 325 ntBASIC6.36□□□□□ -1.39
TPM4P67936 PCBP2P1-201ENST00000437262 977 ntBASIC6.36□□□□□ -1.39
TPM4P67936 EIF5AP4-201ENST00000441206 465 ntBASIC6.36□□□□□ -1.39
TPM4P67936 RPS10P18-201ENST00000442662 495 ntBASIC6.36□□□□□ -1.39
TPM4P67936 CYCSP51-201ENST00000443545 318 ntBASIC6.36□□□□□ -1.39
TPM4P67936 AC092601.1-201ENST00000444526 383 ntBASIC6.36□□□□□ -1.39
TPM4P67936 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.36□□□□□ -1.39
TPM4P67936 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.36□□□□□ -1.39
TPM4P67936 DUTP1-201ENST00000493631 470 ntBASIC6.36□□□□□ -1.39
TPM4P67936 AC074255.1-201ENST00000511259 501 ntBASIC6.36□□□□□ -1.39
TPM4P67936 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.36□□□□□ -1.39
TPM4P67936 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.36□□□□□ -1.39
TPM4P67936 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.36□□□□□ -1.39
TPM4P67936 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.36□□□□□ -1.39
TPM4P67936 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.36□□□□□ -1.39
TPM4P67936 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.36□□□□□ -1.39
TPM4P67936 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.36□□□□□ -1.39
TPM4P67936 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TPM4P67936 AC007346.1-201ENST00000569208 867 ntBASIC6.36□□□□□ -1.39
TPM4P67936 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.36□□□□□ -1.39
TPM4P67936 FAM72A-208ENST00000607379 1139 ntBASIC6.36□□□□□ -1.39
TPM4P67936 AC008833.1-201ENST00000611633 691 ntBASIC6.36□□□□□ -1.39
TPM4P67936 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.36□□□□□ -1.39
TPM4P67936 AL138693.1-201ENST00000622219 129 ntBASIC6.36□□□□□ -1.39
TPM4P67936 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.36□□□□□ -1.39
TPM4P67936 AC010325.3-201ENST00000641084 394 ntBASIC6.36□□□□□ -1.39
TPM4P67936 OR11H2-202ENST00000641517 1085 ntBASIC6.36□□□□□ -1.39
TPM4P67936 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
TPM4P67936 AC026523.2-201ENST00000625039 7739 ntBASIC6.36□□□□□ -1.39
TPM4P67936 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TPM4P67936 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TPM4P67936 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.35□□□□□ -1.39
TPM4P67936 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
TPM4P67936 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.35□□□□□ -1.39
TPM4P67936 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
TPM4P67936 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TPM4P67936 AC079097.1-201ENST00000512187 1399 ntBASIC6.35□□□□□ -1.39
TPM4P67936 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TPM4P67936 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.35□□□□□ -1.39
TPM4P67936 AC006484.1-201ENST00000435086 1884 ntBASIC6.35□□□□□ -1.39
TPM4P67936 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TPM4P67936 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
TPM4P67936 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TPM4P67936 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TPM4P67936 MIR188-201ENST00000385034 86 ntBASIC6.35□□□□□ -1.39
TPM4P67936 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TPM4P67936 AC017078.1-201ENST00000416146 368 ntBASIC6.35□□□□□ -1.39
TPM4P67936 RPL7AP51-201ENST00000422016 760 ntBASIC6.35□□□□□ -1.39
TPM4P67936 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.35□□□□□ -1.39
TPM4P67936 TUBB4BP6-201ENST00000437576 479 ntBASIC6.35□□□□□ -1.39
TPM4P67936 AC092106.1-201ENST00000444291 373 ntBASIC6.35□□□□□ -1.39
TPM4P67936 AC010240.2-201ENST00000445363 1205 ntBASIC6.35□□□□□ -1.39
TPM4P67936 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.35□□□□□ -1.39
TPM4P67936 PPIAP7-201ENST00000454070 489 ntBASIC6.35□□□□□ -1.39
TPM4P67936 RPL36AP55-201ENST00000454114 305 ntBASIC6.35□□□□□ -1.39
TPM4P67936 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.35□□□□□ -1.39
TPM4P67936 RN7SL188P-201ENST00000469842 285 ntBASIC6.35□□□□□ -1.39
TPM4P67936 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.35□□□□□ -1.39
TPM4P67936 GAPDHP71-201ENST00000511530 1003 ntBASIC6.35□□□□□ -1.39
TPM4P67936 AP000620.1-201ENST00000527147 504 ntBASIC6.35□□□□□ -1.39
TPM4P67936 AC122688.1-201ENST00000541494 223 ntBASIC6.35□□□□□ -1.39
TPM4P67936 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.35□□□□□ -1.39
TPM4P67936 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.35□□□□□ -1.39
TPM4P67936 DHFRP1-201ENST00000579682 559 ntBASIC6.35□□□□□ -1.39
TPM4P67936 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.35□□□□□ -1.39
TPM4P67936 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.35□□□□□ -1.39
TPM4P67936 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.35□□□□□ -1.39
TPM4P67936 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.35□□□□□ -1.39
TPM4P67936 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.35□□□□□ -1.39
TPM4P67936 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms