Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.6□□□□□ -1.35
YBX1P67809 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
YBX1P67809 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC6.59□□□□□ -1.35
YBX1P67809 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
YBX1P67809 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
YBX1P67809 ANKRD36BP1-202ENST00000604892 1417 ntBASIC6.59□□□□□ -1.35
YBX1P67809 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC6.59□□□□□ -1.35
YBX1P67809 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
YBX1P67809 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
YBX1P67809 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
YBX1P67809 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.59□□□□□ -1.35
YBX1P67809 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
YBX1P67809 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.59□□□□□ -1.35
YBX1P67809 AC009120.2-204ENST00000621548 2032 ntBASIC6.59□□□□□ -1.35
YBX1P67809 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
YBX1P67809 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
YBX1P67809 AC096992.2-201ENST00000609553 1684 ntBASIC6.59□□□□□ -1.35
YBX1P67809 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.59□□□□□ -1.35
YBX1P67809 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.59□□□□□ -1.35
YBX1P67809 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
YBX1P67809 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
YBX1P67809 RPL24P4-201ENST00000326586 421 ntBASIC6.59□□□□□ -1.35
YBX1P67809 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
YBX1P67809 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
YBX1P67809 RNU6-83P-201ENST00000384568 112 ntBASIC6.59□□□□□ -1.35
YBX1P67809 Y_RNA.578-201ENST00000390903 88 ntBASIC6.59□□□□□ -1.35
YBX1P67809 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
YBX1P67809 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.59□□□□□ -1.35
YBX1P67809 MOB4-205ENST00000409916 829 ntTSL 3 BASIC6.59□□□□□ -1.35
YBX1P67809 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.59□□□□□ -1.35
YBX1P67809 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.59□□□□□ -1.35
YBX1P67809 NAP1L4P2-201ENST00000425958 899 ntBASIC6.59□□□□□ -1.35
YBX1P67809 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.59□□□□□ -1.35
YBX1P67809 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.59□□□□□ -1.35
YBX1P67809 AL590128.1-201ENST00000433407 286 ntBASIC6.59□□□□□ -1.35
YBX1P67809 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.59□□□□□ -1.35
YBX1P67809 AL512326.1-201ENST00000443050 721 ntBASIC6.59□□□□□ -1.35
YBX1P67809 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.59□□□□□ -1.35
YBX1P67809 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.59□□□□□ -1.35
YBX1P67809 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.59□□□□□ -1.35
YBX1P67809 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC6.59□□□□□ -1.35
YBX1P67809 AC090589.1-201ENST00000473109 362 ntBASIC6.59□□□□□ -1.35
YBX1P67809 NAA50-206ENST00000493454 964 ntTSL 2 BASIC6.59□□□□□ -1.35
YBX1P67809 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.59□□□□□ -1.35
YBX1P67809 RN7SL187P-201ENST00000495587 303 ntBASIC6.59□□□□□ -1.35
YBX1P67809 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.59□□□□□ -1.35
YBX1P67809 AC092349.1-201ENST00000504903 310 ntBASIC6.59□□□□□ -1.35
YBX1P67809 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.59□□□□□ -1.35
YBX1P67809 RNU6-720P-201ENST00000516363 108 ntBASIC6.59□□□□□ -1.35
YBX1P67809 MTND4LP26-201ENST00000518144 282 ntBASIC6.59□□□□□ -1.35
YBX1P67809 NPM1P52-201ENST00000518264 846 ntBASIC6.59□□□□□ -1.35
YBX1P67809 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.59□□□□□ -1.35
YBX1P67809 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.59□□□□□ -1.35
YBX1P67809 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.59□□□□□ -1.35
YBX1P67809 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.59□□□□□ -1.35
YBX1P67809 NDUFS5P6-201ENST00000529136 295 ntBASIC6.59□□□□□ -1.35
YBX1P67809 OR9L1P-201ENST00000529493 933 ntBASIC6.59□□□□□ -1.35
YBX1P67809 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.59□□□□□ -1.35
YBX1P67809 ERP27-202ENST00000540097 993 ntTSL 2 BASIC6.59□□□□□ -1.35
YBX1P67809 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC6.59□□□□□ -1.35
YBX1P67809 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
YBX1P67809 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
YBX1P67809 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC6.59□□□□□ -1.35
YBX1P67809 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC6.59□□□□□ -1.35
YBX1P67809 RBM22P1-201ENST00000578589 1214 ntBASIC6.59□□□□□ -1.35
YBX1P67809 MIR5095-201ENST00000578844 88 ntBASIC6.59□□□□□ -1.35
YBX1P67809 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.59□□□□□ -1.35
YBX1P67809 AL353621.2-201ENST00000605340 133 ntBASIC6.59□□□□□ -1.35
YBX1P67809 AL365181.4-201ENST00000609800 547 ntBASIC6.59□□□□□ -1.35
YBX1P67809 AP000255.1-201ENST00000610276 676 ntBASIC6.59□□□□□ -1.35
YBX1P67809 AC122133.1-201ENST00000613964 233 ntBASIC6.59□□□□□ -1.35
YBX1P67809 MIR6849-201ENST00000618543 69 ntBASIC6.59□□□□□ -1.35
YBX1P67809 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
YBX1P67809 Six3os1_1.1-201ENST00000620900 87 ntBASIC6.59□□□□□ -1.35
YBX1P67809 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.59□□□□□ -1.35
YBX1P67809 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.59□□□□□ -1.35
YBX1P67809 AC027559.1-201ENST00000636288 271 ntBASIC6.59□□□□□ -1.35
YBX1P67809 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
YBX1P67809 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
YBX1P67809 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.59□□□□□ -1.35
YBX1P67809 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
YBX1P67809 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
YBX1P67809 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
YBX1P67809 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.59□□□□□ -1.35
YBX1P67809 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
YBX1P67809 AL139805.2-201ENST00000455305 2433 ntBASIC6.59□□□□□ -1.35
YBX1P67809 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
YBX1P67809 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC6.59□□□□□ -1.36
YBX1P67809 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.36
YBX1P67809 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.58□□□□□ -1.36
YBX1P67809 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
YBX1P67809 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
YBX1P67809 AC022034.1-201ENST00000512867 2156 ntBASIC6.58□□□□□ -1.36
YBX1P67809 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.58□□□□□ -1.36
YBX1P67809 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.58□□□□□ -1.36
YBX1P67809 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
YBX1P67809 TNPO1P2-201ENST00000426249 2665 ntBASIC6.58□□□□□ -1.36
YBX1P67809 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC6.58□□□□□ -1.36
YBX1P67809 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
YBX1P67809 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms