Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SPCS3P61009 RN7SKP77-201ENST00000363261 353 ntBASIC4.8□□□□□ -1.64
SPCS3P61009 U3.7-201ENST00000363668 216 ntBASIC4.8□□□□□ -1.64
SPCS3P61009 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.8□□□□□ -1.64
SPCS3P61009 AL096829.1-201ENST00000413677 457 ntBASIC4.8□□□□□ -1.64
SPCS3P61009 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.8□□□□□ -1.64
SPCS3P61009 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC4.8□□□□□ -1.64
SPCS3P61009 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SPCS3P61009 CRIP1P1-201ENST00000427567 185 ntBASIC4.8□□□□□ -1.64
SPCS3P61009 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.8□□□□□ -1.64
SPCS3P61009 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SPCS3P61009 AL645936.1-201ENST00000441979 518 ntBASIC4.8□□□□□ -1.64
SPCS3P61009 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC4.8□□□□□ -1.64
SPCS3P61009 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SPCS3P61009 AL445991.1-201ENST00000450381 475 ntBASIC4.8□□□□□ -1.64
SPCS3P61009 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.8□□□□□ -1.64
SPCS3P61009 PFN1P6-201ENST00000476786 399 ntBASIC4.8□□□□□ -1.64
SPCS3P61009 GLUD1P3-202ENST00000508551 200 ntBASIC4.8□□□□□ -1.64
SPCS3P61009 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.8□□□□□ -1.64
SPCS3P61009 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.8□□□□□ -1.64
SPCS3P61009 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.8□□□□□ -1.64
SPCS3P61009 RNA5SP434-201ENST00000516647 121 ntBASIC4.8□□□□□ -1.64
SPCS3P61009 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC4.8□□□□□ -1.64
SPCS3P61009 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.8□□□□□ -1.64
SPCS3P61009 OR4A42P-201ENST00000531397 938 ntBASIC4.8□□□□□ -1.64
SPCS3P61009 TDGP1-201ENST00000543961 1229 ntBASIC4.8□□□□□ -1.64
SPCS3P61009 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.8□□□□□ -1.64
SPCS3P61009 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SPCS3P61009 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.8□□□□□ -1.64
SPCS3P61009 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC4.8□□□□□ -1.64
SPCS3P61009 ZNF322P1-201ENST00000568013 1209 ntBASIC4.8□□□□□ -1.64
SPCS3P61009 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC4.8□□□□□ -1.64
SPCS3P61009 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.8□□□□□ -1.64
SPCS3P61009 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC4.8□□□□□ -1.64
SPCS3P61009 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC4.8□□□□□ -1.64
SPCS3P61009 Z93930.3-201ENST00000607919 749 ntBASIC4.8□□□□□ -1.64
SPCS3P61009 AC096861.1-201ENST00000616652 240 ntBASIC4.8□□□□□ -1.64
SPCS3P61009 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.8□□□□□ -1.64
SPCS3P61009 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.8□□□□□ -1.64
SPCS3P61009 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SPCS3P61009 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SPCS3P61009 AC217777.1-201ENST00000570034 1471 ntBASIC4.8□□□□□ -1.64
SPCS3P61009 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SPCS3P61009 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SPCS3P61009 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SPCS3P61009 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SPCS3P61009 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SPCS3P61009 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
SPCS3P61009 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.79□□□□□ -1.64
SPCS3P61009 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
SPCS3P61009 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SPCS3P61009 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC4.79□□□□□ -1.64
SPCS3P61009 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC4.79□□□□□ -1.64
SPCS3P61009 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SPCS3P61009 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SPCS3P61009 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.79□□□□□ -1.64
SPCS3P61009 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SPCS3P61009 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SPCS3P61009 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
SPCS3P61009 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
SPCS3P61009 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SPCS3P61009 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.79□□□□□ -1.64
SPCS3P61009 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SPCS3P61009 RNA5SP211-201ENST00000365516 117 ntBASIC4.79□□□□□ -1.64
SPCS3P61009 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC4.79□□□□□ -1.64
SPCS3P61009 AL672167.2-201ENST00000377164 879 ntBASIC4.79□□□□□ -1.64
SPCS3P61009 YWHAZP4-201ENST00000392459 708 ntBASIC4.79□□□□□ -1.64
SPCS3P61009 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.79□□□□□ -1.64
SPCS3P61009 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.79□□□□□ -1.64
SPCS3P61009 MTND2P12-201ENST00000417560 1252 ntBASIC4.79□□□□□ -1.64
SPCS3P61009 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC4.79□□□□□ -1.64
SPCS3P61009 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC4.79□□□□□ -1.64
SPCS3P61009 AC016027.4-201ENST00000450866 277 ntBASIC4.79□□□□□ -1.64
SPCS3P61009 FRG2FP-204ENST00000453982 852 ntBASIC4.79□□□□□ -1.64
SPCS3P61009 TFP1-201ENST00000460564 572 ntTSL 4 BASIC4.79□□□□□ -1.64
SPCS3P61009 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
SPCS3P61009 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC4.79□□□□□ -1.64
SPCS3P61009 TFP1-203ENST00000490470 561 ntTSL 4 BASIC4.79□□□□□ -1.64
SPCS3P61009 AC114324.2-202ENST00000503812 134 ntBASIC4.79□□□□□ -1.64
SPCS3P61009 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC4.79□□□□□ -1.64
SPCS3P61009 AC111000.6-201ENST00000514471 709 ntBASIC4.79□□□□□ -1.64
SPCS3P61009 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.79□□□□□ -1.64
SPCS3P61009 AC021269.1-201ENST00000526860 705 ntBASIC4.79□□□□□ -1.64
SPCS3P61009 AC090424.1-201ENST00000535243 736 ntBASIC4.79□□□□□ -1.64
SPCS3P61009 AC084824.2-201ENST00000548906 345 ntBASIC4.79□□□□□ -1.64
SPCS3P61009 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.79□□□□□ -1.64
SPCS3P61009 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.79□□□□□ -1.64
SPCS3P61009 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.79□□□□□ -1.64
SPCS3P61009 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC4.79□□□□□ -1.64
SPCS3P61009 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.79□□□□□ -1.64
SPCS3P61009 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.79□□□□□ -1.64
SPCS3P61009 AL513327.3-201ENST00000602618 469 ntBASIC4.79□□□□□ -1.64
SPCS3P61009 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.79□□□□□ -1.64
SPCS3P61009 uc_338.26-201ENST00000612659 160 ntBASIC4.79□□□□□ -1.64
SPCS3P61009 AL445670.1-201ENST00000618889 801 ntBASIC4.79□□□□□ -1.64
SPCS3P61009 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.79□□□□□ -1.64
SPCS3P61009 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.79□□□□□ -1.64
SPCS3P61009 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SPCS3P61009 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.79□□□□□ -1.64
SPCS3P61009 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms