Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.4□□□□□ -1.38
VCPP55072 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.4□□□□□ -1.38
VCPP55072 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.4□□□□□ -1.38
VCPP55072 PPP1R11P1-201ENST00000486095 376 ntBASIC6.4□□□□□ -1.38
VCPP55072 RN7SL466P-201ENST00000497546 295 ntBASIC6.4□□□□□ -1.38
VCPP55072 DUTP7-201ENST00000507982 486 ntBASIC6.4□□□□□ -1.38
VCPP55072 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.4□□□□□ -1.38
VCPP55072 ST13P12-201ENST00000508958 1094 ntBASIC6.4□□□□□ -1.38
VCPP55072 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
VCPP55072 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.4□□□□□ -1.38
VCPP55072 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.4□□□□□ -1.38
VCPP55072 AC241377.1-201ENST00000619797 406 ntBASIC6.4□□□□□ -1.38
VCPP55072 AL137067.2-201ENST00000621202 131 ntBASIC6.4□□□□□ -1.38
VCPP55072 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
VCPP55072 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
VCPP55072 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
VCPP55072 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
VCPP55072 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
VCPP55072 NEPNP-201ENST00000404786 1371 ntBASIC6.4□□□□□ -1.39
VCPP55072 AC114876.1-201ENST00000490962 1366 ntBASIC6.4□□□□□ -1.39
VCPP55072 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
VCPP55072 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
VCPP55072 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
VCPP55072 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.4□□□□□ -1.39
VCPP55072 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VCPP55072 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VCPP55072 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
VCPP55072 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VCPP55072 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VCPP55072 GNG5P2-201ENST00000372054 207 ntBASIC6.39□□□□□ -1.39
VCPP55072 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.39□□□□□ -1.39
VCPP55072 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VCPP55072 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VCPP55072 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC6.39□□□□□ -1.39
VCPP55072 AL390879.1-201ENST00000439143 386 ntBASIC6.39□□□□□ -1.39
VCPP55072 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
VCPP55072 GAPDHP23-201ENST00000444823 993 ntBASIC6.39□□□□□ -1.39
VCPP55072 AC091685.2-201ENST00000454924 864 ntBASIC6.39□□□□□ -1.39
VCPP55072 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.39□□□□□ -1.39
VCPP55072 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.39□□□□□ -1.39
VCPP55072 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VCPP55072 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.39□□□□□ -1.39
VCPP55072 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC6.39□□□□□ -1.39
VCPP55072 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.39□□□□□ -1.39
VCPP55072 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.39□□□□□ -1.39
VCPP55072 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.39□□□□□ -1.39
VCPP55072 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.39□□□□□ -1.39
VCPP55072 MIR7155-201ENST00000615925 56 ntBASIC6.39□□□□□ -1.39
VCPP55072 AC096708.4-201ENST00000620563 552 ntBASIC6.39□□□□□ -1.39
VCPP55072 AL136228.1-201ENST00000622221 319 ntBASIC6.39□□□□□ -1.39
VCPP55072 AP000550.3-201ENST00000637734 379 ntBASIC6.39□□□□□ -1.39
VCPP55072 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.39□□□□□ -1.39
VCPP55072 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VCPP55072 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
VCPP55072 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VCPP55072 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
VCPP55072 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VCPP55072 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VCPP55072 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VCPP55072 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VCPP55072 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VCPP55072 AC024587.1-201ENST00000505925 2157 ntBASIC6.38□□□□□ -1.39
VCPP55072 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VCPP55072 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VCPP55072 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.38□□□□□ -1.39
VCPP55072 AL096711.1-201ENST00000404780 554 ntBASIC6.38□□□□□ -1.39
VCPP55072 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.38□□□□□ -1.39
VCPP55072 RNA5SP156-201ENST00000410250 110 ntBASIC6.38□□□□□ -1.39
VCPP55072 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.38□□□□□ -1.39
VCPP55072 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.38□□□□□ -1.39
VCPP55072 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC6.38□□□□□ -1.39
VCPP55072 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.38□□□□□ -1.39
VCPP55072 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC6.38□□□□□ -1.39
VCPP55072 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.38□□□□□ -1.39
VCPP55072 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.38□□□□□ -1.39
VCPP55072 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.38□□□□□ -1.39
VCPP55072 AL731534.1-201ENST00000434711 269 ntBASIC6.38□□□□□ -1.39
VCPP55072 RPL21P133-201ENST00000443666 476 ntBASIC6.38□□□□□ -1.39
VCPP55072 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.38□□□□□ -1.39
VCPP55072 SIAH1P1-201ENST00000479411 923 ntBASIC6.38□□□□□ -1.39
VCPP55072 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
VCPP55072 CYCSP22-201ENST00000517555 339 ntBASIC6.38□□□□□ -1.39
VCPP55072 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.38□□□□□ -1.39
VCPP55072 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.38□□□□□ -1.39
VCPP55072 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.38□□□□□ -1.39
VCPP55072 OR10G5P-201ENST00000532733 358 ntBASIC6.38□□□□□ -1.39
VCPP55072 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.38□□□□□ -1.39
VCPP55072 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
VCPP55072 RNU4ATAC-201ENST00000580972 127 ntBASIC6.38□□□□□ -1.39
VCPP55072 MIR132-201ENST00000591554 101 ntBASIC6.38□□□□□ -1.39
VCPP55072 COX6CP7-201ENST00000597056 208 ntBASIC6.38□□□□□ -1.39
VCPP55072 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
VCPP55072 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VCPP55072 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
VCPP55072 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
VCPP55072 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
VCPP55072 AP000432.2-201ENST00000624164 2048 ntBASIC6.38□□□□□ -1.39
VCPP55072 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.38□□□□□ -1.39
VCPP55072 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.38□□□□□ -1.39
VCPP55072 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms