Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
MSH6P52701 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
MSH6P52701 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.99□□□□□ -1.13
MSH6P52701 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
MSH6P52701 AC011504.1-201ENST00000623331 4103 ntBASIC7.99□□□□□ -1.13
MSH6P52701 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
MSH6P52701 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
MSH6P52701 AC011369.2-201ENST00000624423 1567 ntBASIC7.99□□□□□ -1.13
MSH6P52701 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
MSH6P52701 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.99□□□□□ -1.13
MSH6P52701 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC7.99□□□□□ -1.13
MSH6P52701 AC010168.2-201ENST00000562691 5428 ntBASIC7.98□□□□□ -1.13
MSH6P52701 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.98□□□□□ -1.13
MSH6P52701 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
MSH6P52701 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
MSH6P52701 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC7.98□□□□□ -1.13
MSH6P52701 RNA5SP335-201ENST00000363817 110 ntBASIC7.98□□□□□ -1.13
MSH6P52701 RNA5SP30-201ENST00000365552 115 ntBASIC7.98□□□□□ -1.13
MSH6P52701 ADIG-201ENST00000373348 430 ntTSL 2 BASIC7.98□□□□□ -1.13
MSH6P52701 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.98□□□□□ -1.13
MSH6P52701 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC7.98□□□□□ -1.13
MSH6P52701 AL049745.1-201ENST00000433953 286 ntBASIC7.98□□□□□ -1.13
MSH6P52701 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC7.98□□□□□ -1.13
MSH6P52701 TPT1P13-201ENST00000449760 499 ntBASIC7.98□□□□□ -1.13
MSH6P52701 RN7SL346P-201ENST00000491561 294 ntBASIC7.98□□□□□ -1.13
MSH6P52701 RN7SL447P-201ENST00000494711 245 ntBASIC7.98□□□□□ -1.13
MSH6P52701 AC087360.1-201ENST00000518788 616 ntBASIC7.98□□□□□ -1.13
MSH6P52701 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC7.98□□□□□ -1.13
MSH6P52701 AC137768.1-201ENST00000549998 553 ntBASIC7.98□□□□□ -1.13
MSH6P52701 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.98□□□□□ -1.13
MSH6P52701 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.98□□□□□ -1.13
MSH6P52701 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
MSH6P52701 AC067852.5-201ENST00000589299 310 ntBASIC7.98□□□□□ -1.13
MSH6P52701 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.98□□□□□ -1.13
MSH6P52701 AL021368.3-201ENST00000607119 578 ntBASIC7.98□□□□□ -1.13
MSH6P52701 AL118522.2-201ENST00000616045 615 ntBASIC7.98□□□□□ -1.13
MSH6P52701 TCL6_3.1-201ENST00000619064 137 ntBASIC7.98□□□□□ -1.13
MSH6P52701 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
MSH6P52701 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
MSH6P52701 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
MSH6P52701 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.98□□□□□ -1.13
MSH6P52701 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
MSH6P52701 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
MSH6P52701 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
MSH6P52701 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
MSH6P52701 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.98□□□□□ -1.13
MSH6P52701 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
MSH6P52701 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC7.97□□□□□ -1.13
MSH6P52701 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
MSH6P52701 RNA5SP339-201ENST00000390987 122 ntBASIC7.97□□□□□ -1.13
MSH6P52701 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.97□□□□□ -1.13
MSH6P52701 NENFP1-201ENST00000419476 466 ntBASIC7.97□□□□□ -1.13
MSH6P52701 AC019205.1-201ENST00000421830 730 ntBASIC7.97□□□□□ -1.13
MSH6P52701 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC7.97□□□□□ -1.13
MSH6P52701 AC112187.1-201ENST00000455837 479 ntBASIC7.97□□□□□ -1.13
MSH6P52701 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC7.97□□□□□ -1.13
MSH6P52701 RPL23AP40-201ENST00000487630 390 ntBASIC7.97□□□□□ -1.13
MSH6P52701 AC073610.1-201ENST00000489971 396 ntBASIC7.97□□□□□ -1.13
MSH6P52701 SNRPCP2-201ENST00000504370 475 ntBASIC7.97□□□□□ -1.13
MSH6P52701 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.97□□□□□ -1.13
MSH6P52701 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.97□□□□□ -1.13
MSH6P52701 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
MSH6P52701 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.97□□□□□ -1.13
MSH6P52701 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.97□□□□□ -1.13
MSH6P52701 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
MSH6P52701 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
MSH6P52701 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC7.97□□□□□ -1.13
MSH6P52701 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
MSH6P52701 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC7.97□□□□□ -1.13
MSH6P52701 AC022034.1-201ENST00000512867 2156 ntBASIC7.97□□□□□ -1.13
MSH6P52701 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
MSH6P52701 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.97□□□□□ -1.13
MSH6P52701 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.97□□□□□ -1.13
MSH6P52701 AC010132.2-201ENST00000295493 1043 ntBASIC7.97□□□□□ -1.13
MSH6P52701 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
MSH6P52701 AL356967.1-201ENST00000406305 431 ntBASIC7.97□□□□□ -1.13
MSH6P52701 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC7.97□□□□□ -1.13
MSH6P52701 MYL6P5-201ENST00000412707 459 ntBASIC7.97□□□□□ -1.13
MSH6P52701 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC7.97□□□□□ -1.13
MSH6P52701 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
MSH6P52701 NDUFAF4P3-201ENST00000456468 525 ntBASIC7.97□□□□□ -1.13
MSH6P52701 RN7SL352P-201ENST00000466002 277 ntBASIC7.97□□□□□ -1.13
MSH6P52701 CCDC11P1-201ENST00000503137 1162 ntBASIC7.97□□□□□ -1.13
MSH6P52701 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
MSH6P52701 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.97□□□□□ -1.13
MSH6P52701 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC7.97□□□□□ -1.13
MSH6P52701 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.97□□□□□ -1.13
MSH6P52701 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC7.97□□□□□ -1.13
MSH6P52701 AC137695.1-201ENST00000604126 489 ntBASIC7.97□□□□□ -1.13
MSH6P52701 WBP1LP8-201ENST00000617401 327 ntBASIC7.97□□□□□ -1.13
MSH6P52701 LINC01739-205ENST00000641890 573 ntBASIC7.97□□□□□ -1.13
MSH6P52701 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.96□□□□□ -1.13
MSH6P52701 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
MSH6P52701 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
MSH6P52701 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
MSH6P52701 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.96□□□□□ -1.13
MSH6P52701 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
MSH6P52701 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
MSH6P52701 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
MSH6P52701 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms